Pestalotiopsis fici: PFICI_15235
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Entry
PFICI_15235 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PFICI_15235
Enzymes [BR:
pfy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PFICI_15235
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Ortholog
Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
DUF4198
CoV_NSP15_C
NOMO_3rd
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
19280248
NCBI-ProteinID:
XP_007842007
UniProt:
W3WGK7
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MRISSSLSCLYAAATVSAAPFLTQLDSSTWVFGNDLFNVTQGSVYATEVHYGGHELVGTA
AGHYMGYDGENNFEWTSAAIVSEGDGYIDISFSSSAGDLHWVIFDGLAGSYQYFVNTAVP
DLSILRTLWRLDPSLFLNARTYLRDQPLPDFSLYANATKVQDETWELSDGTFITKYDFSD
FVRDRDYYGIYGSGVVGSWYIFPGGDYHNSNQLSQTLTVHRESSTGDSVQLNVFQDTSHF
RVGQTTPQPVGKIWGPWLWYLNDGSLEDVERQRQDELQSWPYSWLNDTAYHRRGELSGTL
KLSDGRAASGAAVYLGDTNTTVRPLIQGSNYYYTADADENGQFSFSQVRAGEYGLYAWSN
GGDIGDVYSNFTTTNVVVSEGEATELGTLSWDISGLQRIFQIGDFDKKALGFKNGGPPYQ
HGVADQSPANLTYDIDASDVSDWYYAQSLIGTWTVQFALTAADVANHTDRGALLSVSLAG
YSQSAALNISVNGNLLGSLDKDSLASDPALYRSGKTSGEWRFFQYEIGPGILVEGTNTID
FTITRYTQWRGFMWDSVILEWL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatatcttcgagtctgagctgcctctacgcagccgcgacggtctctgcagcacct
tttctcactcagctggatagctcgacctgggtctttggcaacgatctattcaacgtcact
caaggttcggtatacgcaaccgaggtgcactatggcggtcatgagttggtcgggactgct
gctgggcactacatgggttacgacggagagaacaactttgaatggacctctgctgccatc
gtctcagagggcgatgggtatatcgacataagtttctcttcctcagcgggcgatcttcac
tgggtcatattcgatggcctcgcgggatcgtaccagtactttgtaaataccgccgtgccg
gacttgagcattctgagaactttgtggaggcttgacccatccttgttcctcaacgcaaga
acctacctgcgagatcagccgctgccggatttctcgctgtatgcgaacgcgacaaaggtg
caggatgaaacatgggaactcagtgacggcacattcatcaccaagtatgacttttccgac
tttgtgagagaccgagattactacggcatctatggctcaggtgtagttggctcgtggtat
atatttccaggaggtgattaccacaactcgaatcagcttagtcagactttgactgtacat
cgagagtcctctacgggcgattctgtccagctcaatgtcttccaagacacttcccatttc
cgagttggccaaaccactccgcagccggtcggcaagatttggggcccgtggctttggtat
ctgaatgatggctcactggaagacgtcgagaggcagcgccaggatgaactgcaaagctgg
ccatactcgtggctcaatgatacagcctaccatcggcgaggagaattgtcgggaactctc
aagctttccgacggacgcgcagcgtcaggtgctgctgtctatcttggtgacaccaacact
acggtcaggccattgatacagggtagcaactactattacaccgcagacgctgatgagaat
ggtcaattctccttttcacaagtccgtgccggtgaatatggactgtatgcatggtcaaac
ggtggtgatattggagatgtctattccaattttacaaccaccaatgtcgtcgtttctgag
ggcgaggctacagaactgggtactctgagctgggacatctcggggctccaaaggatcttc
cagatcggcgactttgacaagaaggctctcggcttcaagaatggcggcccaccataccaa
cacggtgtggcggatcaaagtccagccaacctgacatacgacatagacgcctcggacgtc
tcggactggtattatgcccaatcactcatcggtacctggaccgttcaattcgccttgaca
gcagcggatgtagcaaaccataccgaccgtggagcgctgctgagcgtttcacttgccgga
tactcgcagagtgccgcactgaacattagcgtcaacgggaatcttctagggtcgctggat
aaggacagtctcgcttccgacccagctctttatcgttccggaaaaacgagcggcgagtgg
aggttctttcagtacgagattggccccggaattcttgttgaaggaacaaacactattgat
tttaccatcacgcggtatactcagtggagagggttcatgtgggacagcgtgattttggag
tggctgtag
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