KEGG   Pseudomonas fragi: AV641_00255
Entry
AV641_00255       CDS       T04285                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pfz  Pseudomonas fragi
Pathway
pfz00300  Lysine biosynthesis
pfz00470  D-Amino acid metabolism
pfz01100  Metabolic pathways
pfz01110  Biosynthesis of secondary metabolites
pfz01120  Microbial metabolism in diverse environments
pfz01230  Biosynthesis of amino acids
Module
pfz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AV641_00255
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AV641_00255
Enzymes [BR:pfz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     AV641_00255
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AMB77598
LinkDB
Position
56548..57378
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLLVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQFKVETKGGIIELNVRSDGQISVDM
GPPRLVPEEIPFIADAQALSYELDVDGQRVELAAVSMGNPHAVLRVDDINAAPVHELGPK
IEHHPRFPARVNVGFLHVIDRQRGQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
ILDLPGGRLSIEWAGPGHSVIMTGPAMRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgttgctgcgttttactaaaatgcacgggctgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcatattttgcccaagcatgccaagcaatggggtgatcggcacacg
ggcgtcggtttcgatcagctgttgctggtcgaagcgccgagcaatcctgaggtggacttc
cgttaccggatcttcaactccgacggttccgaagttgagcagtgcggtaacggtgcacgc
tgcttcgcgcgctttgtgctcgacaagcgtttgaccaccaagcgccagttcaaggtcgaa
accaaaggcggcattatcgaactgaatgtgcgcagcgacgggcaaatcagcgtcgacatg
gggccgccgcgactggtccccgaagagatcccgttcattgccgacgcccaggcgctgagc
tatgaactggatgtcgacggccagcgcgttgaactggcagccgtctcgatgggcaacccc
catgcggtgttgcgcgttgacgatatcaacgctgcgccggtgcatgaactggggccaaaa
attgaacatcacccgcgctttccggcgcgggtcaatgtcggttttctgcacgttatagat
cgtcagcgcgggcaactgcgggtctgggagcgtggtgccggggaaacccaggcctgcggt
accggtgcctgtgccgcggcagtggcggcgatcagccagggctggatggactcgccgttg
attctggatttgcccggtggacgcctgtccatcgagtgggcaggcccgggtcattcggtg
atcatgaccggcccggcgatgcgtgtttacgaaggacaagtccgtttatga

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