Pseudomonas fragi: AV641_00255
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Entry
AV641_00255 CDS
T04285
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00300
Lysine biosynthesis
pfz00470
D-Amino acid metabolism
pfz01100
Metabolic pathways
pfz01110
Biosynthesis of secondary metabolites
pfz01120
Microbial metabolism in diverse environments
pfz01230
Biosynthesis of amino acids
Module
pfz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AV641_00255
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AV641_00255
Enzymes [BR:
pfz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AV641_00255
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AMB77598
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Position
56548..57378
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLLVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQFKVETKGGIIELNVRSDGQISVDM
GPPRLVPEEIPFIADAQALSYELDVDGQRVELAAVSMGNPHAVLRVDDINAAPVHELGPK
IEHHPRFPARVNVGFLHVIDRQRGQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
ILDLPGGRLSIEWAGPGHSVIMTGPAMRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgttttactaaaatgcacgggctgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcatattttgcccaagcatgccaagcaatggggtgatcggcacacg
ggcgtcggtttcgatcagctgttgctggtcgaagcgccgagcaatcctgaggtggacttc
cgttaccggatcttcaactccgacggttccgaagttgagcagtgcggtaacggtgcacgc
tgcttcgcgcgctttgtgctcgacaagcgtttgaccaccaagcgccagttcaaggtcgaa
accaaaggcggcattatcgaactgaatgtgcgcagcgacgggcaaatcagcgtcgacatg
gggccgccgcgactggtccccgaagagatcccgttcattgccgacgcccaggcgctgagc
tatgaactggatgtcgacggccagcgcgttgaactggcagccgtctcgatgggcaacccc
catgcggtgttgcgcgttgacgatatcaacgctgcgccggtgcatgaactggggccaaaa
attgaacatcacccgcgctttccggcgcgggtcaatgtcggttttctgcacgttatagat
cgtcagcgcgggcaactgcgggtctgggagcgtggtgccggggaaacccaggcctgcggt
accggtgcctgtgccgcggcagtggcggcgatcagccagggctggatggactcgccgttg
attctggatttgcccggtggacgcctgtccatcgagtgggcaggcccgggtcattcggtg
atcatgaccggcccggcgatgcgtgtttacgaaggacaagtccgtttatga
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