Pseudomonas fragi: AV641_01205
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Entry
AV641_01205 CDS
T04285
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfz03000
]
AV641_01205
Transcription factors [BR:
pfz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AV641_01205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR
HTH_23
PBP_like_2
HTH_50
HTH_24
PBP_like
HTH_30
HTH_28
HTH_29
HTH_41
HTH_20
HTH_8
HTH_Crp_2
HTH_AsnC-type
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AMB77777
LinkDB
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Position
255567..256430
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AA seq
287 aa
AA seq
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MLSAELKAFYRVAQLGSITQAAKKLGLSQPTVTTQIRQLESQYAVELFYRGGRRLTLSDD
GVRLLPMVKALIQQEGDIEFFLRNSGQGTGTLRIAATAPYYILDLVKNFRERLPQIAVSV
DIGNSQQVLEALDEYRVDIAASSQLVEDPRLIRRTLGTDPLVLAVHRNHPLAKFEHVPLS
ALAGHCLLMREQGSTTRKLTEQLLDGAGVGFGPLLEIGSRESIREAVLRNIGISIIARQE
VPHDPQLRVLTLEGAPQIAEYLYCLKERKSARLPAAFLGLAQEMAPA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagtgccgagctgaaagcgttttaccgggtggcccaattgggcagcattactcag
gcagcgaaaaagctcgggctcagtcagccgaccgtgaccacacagattcgccagcttgaa
agccagtacgcggtggagttgttctaccgcggcgggcggcgcctgaccctcagcgatgac
ggcgtgcgtttgctgccgatggtcaaggcgctgattcagcaagagggcgatatcgagttt
tttctacgcaacagtggtcagggcactggcaccttgcgcatcgcggccactgccccgtac
tacatcctcgatttggtgaaaaactttcgcgagcgactgccgcaaattgccgtgtcggtg
gacatcggcaattcccagcaagtgctcgaagcgctggacgagtaccgggttgatatcgcc
gcttcgtcgcaactggtggaggatccacggctgattcgccggactctgggcaccgacccg
ctggtgctggcggtgcatcgcaatcacccgctggccaagttcgaacacgtgccgctcagc
gcgctggccgggcattgtctgctgatgcgcgaacagggttcgaccacccgcaaactaacg
gagcagctgctggacggcgccggtgtgggctttggtccgctgctggaaatcggcagtcgg
gagtcgattcgcgaggcggtgttgcgcaacatcgggatcagcatcattgcccgtcaggaa
gtgccccacgatccgcaattgcgggtgctgaccctcgaaggtgcgccgcagatcgcggaa
tacctgtactgcctcaaagagcgcaaatcggcgcggctgccggcagcctttttgggcctg
gcgcaggaaatggccccggcctga
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