Pseudomonas fragi: AV641_02685
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Entry
AV641_02685 CDS
T04285
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pfz
Pseudomonas fragi
Pathway
pfz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AV641_02685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfz03400
]
AV641_02685
DNA repair and recombination proteins [BR:
pfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AV641_02685
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AV641_02685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_23
AAA_22
RsgA_GTPase
AAA_33
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
cobW
AAA_25
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AMB78050
LinkDB
All DBs
Position
complement(565555..568389)
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC
PDHDIPLEAQTVSQMVDLVLAQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN
GRLCELDELPKLDKQKKHTIDVVVDRFKVRPDLQQRLAESFETALKLADGIALVAPMDDE
PGEEMIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGALAKHYDFSLEVPFGELPADKQKVILYGSGTHNVDFRYL
NDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLSTQSCPDCRGTRLRREARHV
WVGEKTLPAVTNMPIGDATEYFSTLSLTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAQGTPAEVMAHPDSLTGKYLSGRVKIPVP
AKRTPRNKKMTLSLKGARGNNLRNVDLEIPLGLLTCVTGVSGSGKSTLINNTLYPLSATA
LNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFSGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKSIHEVLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIAVGTPEDVAEMAQSHTGFYLKPLLIRDRD
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagatcctgatacgtggggcacgaacccacaacctgaagaacatcgacctgacc
ctgcccagggacaagctgatcgtcatcaccggactgtctggctccggcaaatcatccctg
gcgtttgatacgctgtacgctgaaggccaacgccgttatgtcgagtcgctgtcggcctat
gcccggcagttcttgtcgatgatggaaaagcctgacgtcgataccatcgaaggtctgtca
ccggcgatatccatcgagcagaaatcaacatcgcataacccgcgttccactgtcggcacc
atcaccgaaatttatgattacctgcgcctgctgtatgcccgcgtaggcatcccccgctgc
cccgatcacgacatcccgcttgaagcccaaaccgtcagccaaatggtcgacctggtactg
gcgcagccggaaggcagcaaactgatgctcctggcccccgtgattcgcgagcgcaaaggt
gaacacctttcggtttttgaagagctgcgcgctcaaggtttcgtgcgggcccgggtcaat
ggcagactctgcgaactggacgagctgcccaagctcgacaagcagaagaagcacactatt
gatgtagtggttgaccgcttcaaggttcgccctgacctgcaacagcgcctggccgagtca
ttcgagaccgcgctgaagctggccgacggcattgctctggttgcacctatggacgacgag
ccgggcgaagagatgatcttctccgcgcgcttcgcctgcccgatctgcggccatgccatc
agcgaacttgagcccaaactgttttccttcaacaaccctgccggggcgtgtccgacctgt
gacggtttgggggtcaagcagtttttcgatatcaaacgcctggtcaatggcgagctgacg
ctggccgaaggcgccatacgcggctgggaccggcgtaacgtttattacttccagatgctc
ggggcgctggccaagcattacgacttcagtctggaagtgcccttcggtgaactcccggcc
gacaagcaaaaagtcattttgtatggcagcggcacccataacgttgatttccgctatctg
aatgatcggggcgatatcgtcaagcgctcgcacccgtttgaaggcatcgtgcccaacctg
gagcgccgctatcgcgaaaccgaatcggccactgtgcgcgaagagctggccaagttcctg
agcactcagtcttgcccggattgccgcggtacccgcctgcgtcgcgaagcccgtcacgtc
tgggtcggcgagaaaaccctgccggccgtgaccaatatgccgatcggggatgcaaccgag
tatttcagcaccctgagcctgaccgggcgccgcggggaaatcgccgacaagatcctcaag
gaaattcgcgaacgcctgcagtttttggtgaacgtgggcctggactatctgtcgctggat
cgcagtgctgacaccctgtctggcggtgaggcgcaacgtatccgtctggccagccagatc
ggcgcaggtctggtcggggtgctgtacatcctcgacgagccctccatcggtctgcatcag
cgcgataacgatcgcctgctcggcaccctcaagcatctgcgcgacatcggcaacacagtg
attgtggtggagcatgacgaggatgcgattcgtctggcggactatgtggttgatatcggc
ccgggcgccggggtgcatggcggacacatcgttgcccaaggcacgcctgccgaggtgatg
gcgcatccggattcgctgaccggtaagtacctgtcgggccgtgtgaaaattcccgtgccg
gccaaacgtacgccgcgcaacaagaagatgacgctgtcgctcaagggcgcccgcggcaac
aacttgcgcaacgtggatctggaaatccctctggggctgctgacctgtgtgaccggggtt
tcgggttcgggcaagtcgacgctgatcaacaacacgctctacccgctcagtgctaccgcc
ctgaatggcgcgaccaccctggaggccgcggcgcacgacagcatcaaaggccttgagcat
ctggacaaggtggtcgatatcgaccagagcccgatcggtcgtacccctcgttccaacccg
gcaacgtacaccgggctgttcacgcctatccgcgagttgttttccggcgtaccggaatcc
cgctcccggggctacgggccagggcgtttctccttcaacgttaagggcggacgctgcgag
gcatgtcagggcgatggcctgatcaaggtggaaatgcactttctgcctgacatctacgtt
ccttgtgacgtgtgcaagagcaagcgctacaaccgtgaaacccttgaaatcaaatacaag
ggcaagagcattcacgaagtgctggagatgacgatcgaagaagcccgtgtgttcttcgac
gcggtgcctgcactcgcgcgcaagcttcagacactgatggatgtaggtctgtcgtacatc
aagctggggcagtccgccacgacgctgtcaggcggcgaggcgcaacgggtcaaactgtcc
cgcgagctgtccaagcgcgataccggcaagaccctgtatatcctcgatgaacctacaaca
ggcctgcactttgctgacatccagcaattgctggatgtgctgcatcgactacgagaccac
ggcaatacggtggtggtgatcgaacacaacctggacgtcatcaagactgctgactggctg
gtggatcttgggccagaaggcggctccaaaggtgggcagatcatagcggtcggcacaccg
gaagacgtggctgagatggcgcaatcccatacaggcttctatttgaagccgctgctgatc
cgcgacagggattaa
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