Pseudomonas fragi: AV641_02700
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Entry
AV641_02700 CDS
T04285
Name
(GenBank) mechanosensitive ion channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_02700
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_02700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AMB78053
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Position
570814..572922
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AA seq
702 aa
AA seq
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MFNFKAAIVLLILLLSGNGILQAAPTLASVIKAEETDGKPPVLVDGGLLGALGEGMDQIQ
ERLGLSARLLGSWSLRSELAVDEVGELVEQASAHPSWGALGDFVLLPAIWFGGFFGLMLT
GRLLVRYLDMTRAINTRPRIQALVGYVVQYLLPAVISLVLTLYASRYLQDTIGRSLGMTL
TYAGSAGVFSVALVLALSAMFEVGHKRIAVQIIRKYSRRPLFLIGFFAALSDGMNSPQIA
LQIGDNIASCLSVFAGLLACIIFAFLAIRLRRPVAHLIRDRALAQRLGQPALQESLRIFS
ALWYWPILLMLVVTALNLLGIGEGSERAMRGALLTSGLIIGAVFLSTILHHSFRTPTRRT
SIYRERLLNVLYALLRIALAVTFIELLSQIWGFSLLAFASDSNTGKVISDSLGRILLILL
VTWLAWVVLDTAIQQTLEPTVTRHGTREPSTRVKTILPLMRNAIKVILVVVCTITTMANL
GVNVAPFLAGAGVIGLAIGFGSQQLVQDVITGLFIIIEDTISVGDWVVVDSNHAGTVEGL
TIRTLRLRDSRGFVHSVPFGQIKAVINHSRQFAYAFFSVQFTYDTDTDQAIDMIRQAGSQ
ISDDPLLSLSLQGSLTVFGVDSMNLDGVTITAQFRTMSGAQSSVSRAFNDRLKKLVDKCD
DVHFAQHYPQGFLMPVRDTGEPAPAAEQPPSRLLLTDMPPQL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaatttcaaagcagcgattgtgcttctcatcctgttgctctcaggcaacggcatt
ctccaggcagcccccacgctggcctcggttatcaaggcagaagagacggatggcaagcct
ccggtgctggtcgatggcggcttgctgggtgccttgggcgagggtatggaccagatccag
gaacggctcggcctgagcgctcgtctgctgggctcctggagtttgcgctcagagcttgcg
gtggatgaagtcggtgaactggtcgaacaggcatcggctcatccctcatggggcgccttg
ggggacttcgtcctgttgccagccatctggttcgggggttttttcgggctgatgctgacg
gggcgcttgctggtgcgatacctggatatgacgcgtgcgatcaacaccaggccgcgcata
caggcacttgtcggttatgtggtgcagtaccttttgccggcagtgataagtctggtgctg
accttgtatgccagtcgttatctgcaagacaccattggccgttcgctggggatgaccctg
acctatgcgggcagtgccggggtgttcagtgtggcgctggtgctggcactcagtgcgatg
tttgaagtcggacacaagcggattgcagttcagatcattcgcaagtattcgcgccggcca
ctgttcctgatcggcttttttgccgcgctgagtgacgggatgaacagcccgcaaattgcg
ctgcaaattggcgataacattgcgagctgtctgtcggtttttgccgggttgctggcgtgc
atcatttttgcctttctggccatacggttgcgtcgccccgtagcgcacctgattcgggac
cgtgcactggcgcagcgtcttggtcagcctgcactgcaggagtcgttgcgtattttttcg
gcgttgtggtactggccgatactgctgatgctggtggtcacggcgctcaatttgctggga
ataggcgagggcagtgagcgtgccatgcgcggtgcgctgctgacttcaggactgatcatc
ggcgcggtttttttaagtacgattttgcaccactcatttcgtacgccgacccgccgtaca
agcatctatcgagagcgtttactgaatgtgctttatgcattgctgcgtattgctctggct
gtgacctttatcgaactcctgtcccagatctgggggttctccctgctggcgttcgcctca
gacagcaacaccggcaaggtcatcagcgattcgctggggcgcatcctgttgatcctgctg
gtgacatggctggcctgggtggtgctcgataccgccatccagcaaacgctggaacctaca
gtgacccgacatggcacccgcgagccgagcacccgcgtcaagaccatcctgccgctgatg
cgcaatgcaataaaagtaattctggtggtggtctgcaccatcaccaccatggccaacctg
ggtgtcaacgtcgcgcctttcctcgctggtgccggggtcatagggctggcaatcggcttt
ggttcccagcagctggtacaagacgtcattacggggctgttcattattattgaggacacc
atctctgtcggcgactgggtggtggtcgactccaaccatgcgggtaccgttgaggggctg
accattcgcaccttgcgcctgagggactcgcggggcttcgtgcattcggtgccctttggt
cagatcaaggcggtgatcaaccattcccggcagtttgcgtacgcatttttctcggttcag
ttcacctacgacaccgacaccgatcaggccatcgacatgatccgccaggccggaagccag
atcagtgacgatcctttgctcagtctcagcctgcagggctcgctgacggtattcggggtc
gacagcatgaatctcgatggcgtaaccattaccgctcagttcagaaccatgtccggcgcc
cagagctccgtcagtcgggctttcaatgaccggctcaaaaagcttgtggataagtgtgac
gatgtccactttgcgcaacattatccacagggattcctgatgcccgtacgcgataccggc
gaaccggcaccggctgccgagcagccgccttccaggttgctgctcactgacatgccgccg
cagctgtag
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