Pseudomonas fragi: AV641_02965
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Entry
AV641_02965 CDS
T04285
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfz01011
]
AV641_02965
Enzymes [BR:
pfz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AV641_02965
Peptidoglycan biosynthesis and degradation proteins [BR:
pfz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AV641_02965
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Paralog
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Motif
Pfam:
SLT_2
SLT
Motif
Other DBs
NCBI-ProteinID:
AMB78102
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All DBs
Position
623467..624477
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AA seq
336 aa
AA seq
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MQVMRGWAARYASWMGLLGLFGAAQGAVAGDYEGSPQVAEFVGEMTRDYGFAGEQLMAVF
RDAERKQSILDAISRPAERVKQWKEYRPIFISDARVARGVDFWREHEAVLARAEKEYGVP
AQVIVSIIGVETFYGRNTGSYRVIDALSTLGFDYPPRAEFFRKELREFLLLTREEQVDPL
SLKGSYAGAMGLPQFMPSSFRAYAVDFDGDGHINIWSNPDDAIGSVASYFKRHGWVAGEP
VVVRADVQGDRADEGLTQGIEPVKTVGELRALGWSGHDALPDDLPVTAFRLEGVNGPEYW
MGLKNFYAITRYNRSVMYAMAVHQLSDLLVQARGNK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaatgcgtggctgggccgctcgatacgcgtcctggatgggcctgctgggtctg
ttcggggcagcgcagggcgcggtggccggcgactatgaaggctcgccccaggtggctgag
tttgtcggtgaaatgactcgcgattacgggtttgccggcgagcagctgatggccgtgttc
cgtgatgccgagcgcaagcaaagcatcctcgatgcgatctcgcgtccggccgagcgggtc
aaacagtggaaggaataccgcccgatctttatctctgacgcccgtgtggcccggggtgtg
gatttctggcgcgagcacgaagccgtgctggcccgtgccgagaaggagtatggggttccg
gcccaggtcattgtgtcgattatcggtgtcgaaaccttttacgggcgcaacaccggtagc
tatcgggtgattgatgcgctgtcgaccctgggttttgactacccgccgcgcgccgagttt
ttccgcaaggagttgcgtgaatttctgctgctgacccgcgaagaacaagtcgatccgctg
agcctcaagggctcttatgccggggccatggggttgccgcagttcatgccgagcagcttt
cgtgcctacgcagtggacttcgacggcgatggccacattaatatctggagcaatccggac
gacgccatcggcagtgttgccagttacttcaagcgtcacggctgggtggccggtgaaccg
gtggtggtgcgtgccgacgtacagggcgacagggcagatgaaggcttgacccagggcatc
gaaccggtcaaaaccgtcggggagttgcgagcgctgggctggtcgggtcatgatgcgctg
ccggacgacctgccggtcacggcgttccgtcttgaaggcgtcaatggccctgaatactgg
atgggcctgaagaatttttatgcgatcacgcgctataaccgcagcgtgatgtacgccatg
gcagtgcatcaactgtccgacttgctggttcaagcacggggcaacaagtaa
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