Pseudomonas fragi: AV641_03425
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Entry
AV641_03425 CDS
T04285
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfz03016
]
AV641_03425
Enzymes [BR:
pfz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
AV641_03425
Transfer RNA biogenesis [BR:
pfz03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
AV641_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Cons_hypoth95
Methyltransf_11
Methyltransf_12
Methyltransf_15
RrnaAD
MTS
DREV
TRM5-TYW2_MTfase
Ubie_methyltran
PrmA
Motif
Other DBs
NCBI-ProteinID:
AMB78185
LinkDB
All DBs
Position
complement(732255..733343)
Genome browser
AA seq
362 aa
AA seq
DB search
MSALPFDSATYAIELEAKANRLRELLAPFDAPEPQVFDSPLKHFRLRAEFRLWREGGERH
YAMFAPDDKRTPILIEDFPIASLRINQLMPQLKAAWKASSALSHKLFQVEFQTTLSGDAM
VTLCYHRPLDEHWQTAAEQLAKDLDISVIGRSKGKRAVIGRDHVVEQLEVAGRTFTYQQP
EGAFTQPNGTVNQKMLNWAYEALGERQDDLLELYCGNGNFTLPLATRVRKVLATEISKTS
VYAALNNLRDNAVDNVTLVRLSAEELTEALNEVRPFRRLQGIDLKSYEFGSVFVDPPRAG
MDPDTCELTRRFDNILYISCNPATLAENIAQLHDTHRIERCAVFDQFPWTHHMESGVLLV
RR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctttgccgttcgattctgctacctacgccattgagctcgaagccaaggccaat
cgcctgcgcgagctgctggcgcccttcgatgcacctgaaccccaggtgttcgactcgccc
ctcaagcactttcgcctgagggccgaattccgcctgtggcgcgaagggggcgaacgtcac
tacgccatgtttgcgccggatgacaagcgcacgccgatcctgatcgaagacttcccgatt
gccagcctgcgcatcaatcaactgatgccgcagctcaaggccgcctggaaagccagctcg
gccttgagccacaagctgttccaggtggagttccagaccactctgtccggcgatgcaatg
gtcacattgtgctatcaccgcccgctggacgagcactggcaaaccgctgccgagcagttg
gccaaagacctggatatcagcgtgattggccgctccaaaggtaaacgcgcggtgatcggc
cgtgatcacgtggtcgagcagctggaagtggcaggccgtaccttcacttatcaacagccc
gaaggtgcgttcacccagccaaacggcacggtcaaccagaagatgctcaactgggcatac
gaagcgttgggcgaacgtcaggatgatctgctggagctgtattgcggcaacggcaacttc
accctgccgctggccacccgcgtgcgcaaggtgctggctaccgaaatcagcaagacctcg
gtctatgccgcgctgaacaatctgcgcgacaacgctgtggataacgtgacgctggtgcgt
ctgtcggccgaagagctgaccgaggccctgaacgaagtacgtccgttccgccgcttgcag
ggcatcgacctgaaaagctacgagttcggcagcgtcttcgtcgacccgccacgcgcgggc
atggacccggacacctgcgagctgacccgacgcttcgacaacatcctgtacatctcctgc
aacccggccaccctggcggaaaacatcgcccagctgcacgatacccaccgtatcgaacgt
tgcgccgtgttcgaccagttcccctggacccaccacatggaatcgggcgtattgctggtt
cgccggtaa
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