Pseudomonas fragi: AV641_03490
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Entry
AV641_03490 CDS
T04285
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfz03400
]
AV641_03490
DNA repair and recombination proteins [BR:
pfz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AV641_03490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
SLFN-g3_helicase
AAA
nSTAND3
AAA_24
RecA_N
nSTAND_NTPase5
AAA_14
Rad51
NTPase_1
AAA_5
MCM
ABC_tran
zf-C2H2_6
AAA_29
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AMB78197
LinkDB
All DBs
Position
745534..746901
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AA seq
455 aa
AA seq
DB search
MAKPKRIYGCTECGATFPKWAGQCGECGVWNTLVETIVESGAAAPPSGRTGWTGQQAQIK
TLAEVSIAEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCHMASRMP
ALYVTGEESQQQVAMRARRLGLPQDQLKVMTETCIESIIATAKLEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKSSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHMSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNKPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPMGNAPKESPPGLKVIGVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccaagcgcatatacggctgcaccgagtgcggcgcaactttccccaagtgg
gccgggcagtgcggtgagtgcggcgtctggaacaccctggtcgaaaccattgttgaaagt
ggtgctgccgcgccacccagcgggcgcaccggctggaccgggcaacaagcccagatcaaa
accctggccgaggtcagcattgctgaaatcccgcgcttctccaccgcctcgggcgagctg
gaccgggtgctcggtggcggtctggtggacggctcggtggtgctgatcggcggcgatccc
ggtatcggtaaatcgaccattctcctgcaaactttgtgtcatatggcctcgcgcatgcct
gcgctgtatgtcaccggcgaggaatcgcagcagcaagtagccatgcgcgcccgccgtctg
ggcttgccccaggatcagctcaaggtcatgaccgagacctgcatcgaaagcatcatcgcc
accgccaagctggaaaaacccaaggtcatggtgatcgactcgatccagaccatcttcacc
gagcagctgcaatcggccccgggtggcgtgtcgcaagtgcgtgaaagtgcggcattgctg
gtgcgctatgccaagtccagcggcaccgcgatcttccttgtgggccacgtcaccaaagag
ggcgcgctggccgggccccgggtgctggagcacatggtcgacaccgtgctgtatttcgag
ggcgagtccgacggtcgtttgcgtttgttgcgggcggtaaaaaaccgcttcggcgcagtt
aacgaactgggcgtgttcggcatgaccgacaagggcctgaaagaggtctccaacccgtct
gcgattttcctcacccgggcccaggaagaagtgcccggcagtgtggtcatggccacttgg
gaaggcacacgcccgatgctggtagaggtgcaggcactggtggatgacagccacatgtcc
aatccgcgccgggtcaccctgggcctggatcaaaaccgcctggccatgttgctggctgtc
ctgcatcgccacggtggaattccgacccacgatcaggatgtattcctcaacgtggtgggc
ggggtcaaggtgctggagaccgcgtccgacctcgcgctgatggccgccgtgatgtccagc
ctgcgcaataaaccgctgccccacgatctgctggtatttggcgaggtggggttgtcggga
gaagtacgaccagtgcccagcggtcaggaacgcttgaaagaggcggccaagcacggtttc
aaacgggccatcgtgcctatgggcaacgcccccaaagagtcgccgccgggtctgaaggta
attggcgtgacccgtctggaacaggcgctggatgcattgtttgagtag
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