Pseudomonas fragi: AV641_03510
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Entry
AV641_03510 CDS
T04285
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00260
Glycine, serine and threonine metabolism
pfz00460
Cyanoamino acid metabolism
pfz00630
Glyoxylate and dicarboxylate metabolism
pfz00670
One carbon pool by folate
pfz00680
Methane metabolism
pfz01100
Metabolic pathways
pfz01110
Biosynthesis of secondary metabolites
pfz01120
Microbial metabolism in diverse environments
pfz01200
Carbon metabolism
pfz01230
Biosynthesis of amino acids
pfz01240
Biosynthesis of cofactors
pfz04981
Folate transport and metabolism
Module
pfz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AV641_03510 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AV641_03510 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AV641_03510 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AV641_03510 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AV641_03510 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AV641_03510 (glyA)
Enzymes [BR:
pfz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AV641_03510 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AMB78201
LinkDB
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Position
complement(750582..751835)
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AA seq
417 aa
AA seq
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MFSRDLTLAKFDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDANGLIDYDEVERLAVENKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLIL
AKANADIEKKLNSAVFPGSQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKVEECRELAGWICDILDDINNEAVIDAVREKVKAICAKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgacacttgccaagttcgacgccgacctttttgccgccatggag
caagaagctcagcgccaggaagaacatattgagctgatcgcttcggaaaactacaccagc
ccagcggtcatggaagctcaaggctcggttctgaccaacaagtacgccgaaggttatccg
ggcaagcgttactacggtggctgcgaatacgtcgacgtcgtcgagcaactggccatcgac
cgtgcaaaagaactgttcggcgccgattacgccaacgttcagccgcacgccggctcccag
gccaacagcgctgtatacctggccctgctgtcggccggtgacaccattctgggcatgagc
ctggcccacggcggtcacttgacccacggcgccagcgtttcgtcctcgggcaagctgtac
aacgccatccagtacggtatcgacgccaatggcctgatcgactacgacgaagttgaacgt
ctggccgttgagaacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctcgacttcccgcgtttccgcgctatcgcagacaaagtcggcgcctacctgttcgtcgac
atggcacacgtggccggtctggttgcagcgggcgtttacccgaacccggttccttatgct
gacgtagtgaccaccactacccacaaaaccctgcgcggtccacgtggcggcctgatcctg
gccaaagccaacgccgacatcgagaagaagctgaattcggctgttttcccgggttcccag
ggcggtccgctggagcacgttatcgcggccaaggccgtgtgcttcaaggaagcgctgcag
cctgagttcaaggcttaccagcaacaagtggtcaagaacgctcaggccatggcttcggtg
ttcatcgagcgcggttttgacgtggtctcgggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaagatgctgacgccgctctgggcaaagccttc
atcaccgtgaacaaaaactccgtaccgaacgatccacgctccccgttcgttacctcgggt
ctgcgtttcggtactccggctgtcaccacccgcggcttcaaggttgaagaatgccgtgaa
ctggcaggctggatctgcgacatccttgacgacatcaacaacgaagccgttattgatgcc
gttcgcgagaaggtcaaagccatttgcgccaagctgcctgtttacggcaactga
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