Pseudomonas fragi: AV641_03515
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Entry
AV641_03515 CDS
T04285
Name
(GenBank) diguanylate phosphodiesterase
Organism
pfz
Pseudomonas fragi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
DUF4123
Motif
Other DBs
NCBI-ProteinID:
AMB78202
LinkDB
All DBs
Position
complement(751954..755769)
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AA seq
1271 aa
AA seq
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MRGTLKGALATLVLLLLAMLFWLLIEQFRNAIQQERLSSINYSADLADHINLSMELRAET
ALNLLPAYAPPKDSLQLQELLERLRQTLPPLQSLALLSPAGEVLLDSTGISPDAAFLADW
IKNIRLYSRTAGYFYGNNRDASVAYLLLRQTGDTTNGYWLLRMTPDLLQNLTRQTLNSNR
PQWQVENTLTDQVLSTSTAPVTRLSSSDPRDMDDTVLLTPLRNSDWQLRGLFNDQMAAQQ
LLPGLIGKCLLGLLFSMLPVIALLNMRRRQRQLHEGRRRYHDIFEGTGVALCVLDLSSLP
GFLEREKIQDSHALKQWLNNQPQHRRQLFEQLRITEVNQVAMQLLEVESEDGAWSKLISG
APQAGSAIGYQLVEAVLNRLQQLELEIKLADAGGRDQHLWLVLRLPDTRLDYHAVILSIT
DITNRKLIELSLQERESFWSDVVRTVPDHLYVQDVTSQMMIFSNHHLGHTLGYNAAELKQ
MGAYFWELLLHPDDAGHYHELRHQQRHGNYVRRLQCQLRFRHRSGVWRSFEIREQALALG
TGEQVTRIVGVAKDITDQIEASESLRDSEQRYRMLAESISDVIFSTDSRLCLNYVSPSVQ
TVLGYDAQWVFNNGWQSTIANPQQLAGIYSLLARVSAALDTPEQLAPLRTQVQTQVFLLD
CLRADGRKIPIELRLVLVWDESNTFEGILGVGRDISQQRNAEKDLRMAATVFEHSTSAIL
ITDPAGYIVQANEAFSRVSGYAVAQVLDQLPSMLTVDEQQQAHLRYVIKQLNQHRSWEGE
VWLKRRSGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLP
NRTLFQDRLHTALQQGDRNKSWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMATRLLACV
DDDDTVARMGGDEFTLLLQPRATRQMALNRAISVAEQILASLVQPFVLESREFFVTASIG
IALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLELESDLRHALEQ
EEFVLYYQPQFSGDGKRLTGVEALLRWNHPRRGLVPPGDFIPVLEELGLVVDVGDWVLAA
ACRQLKHWHQAKVRVPKVSVNISARQFSDGQLGNRIANILKETGLPPACLELELTESILM
REVSEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPCGEQDA
QIARAIIAMAHSLNLAVIAEGVETHEQLVFLREHGCDEVQGYLLGRPLPAHQLEKQLLAK
QRHTASDELPI
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggcacgttaaaaggcgcactggcaaccctggtcctgttgctgctggcaatgctg
ttctggctattgattgaacagttccggaacgcgatccagcaggagcgcctgtcgagcatc
aattacagcgcagacctggccgaccacatcaacctgagtatggaactcagggccgaaacc
gccctcaatctgctgcctgcctatgcaccccccaaagattcgctccagctacaggagctg
ctcgaacggctgcgccaaaccttgccgcccctgcaaagcctggctttattgagcccagcc
ggagaagtgctgctcgacagcacgggcatcagccccgatgcggccttcctggccgactgg
ataaaaaacatccggttgtacagccgtacagccgggtatttttacggcaacaacagggat
gccagcgttgcttatctgttgttgcgccagaccggtgacacgaccaacggttactggctg
ctgcgcatgaccccggatctgctgcaaaacctcacgcgccagaccctgaacagcaaccgc
ccccaatggcaggtcgaaaacaccctgacggatcaggtgctcagcaccagtaccgctcct
gtcacccggctatcaagctccgatccccgggacatggatgacacagtactgctgaccccc
ttgcgcaacagcgactggcagttgcgcgggctgttcaatgaccagatggcggcgcaacag
ctgctacccgggctgattggcaaatgcttgctcggcctgctgttctcgatgctgccggtg
atcgcacttttgaatatgcgccgccgccagcgccagctgcacgaaggccggcgtcgttat
cacgatatttttgaaggcaccggcgtcgcgctctgcgtgctcgacctgtccagcctgcct
ggctttcttgagcgcgaaaaaatccaggacagccatgccctcaaacaatggctgaacaac
cagccgcagcatcggcgccagctgtttgaacaattgcgcatcaccgaagtgaaccaggtc
gccatgcagttgctggaggtcgaatccgaggacggcgcctggtcaaaactgatcagcggc
gcccctcaagccggctcggccattggttatcaactggtcgaggccgtgctcaaccggctg
caacaactggagctggaaatcaaactggccgacgccggggggcgtgaccagcatttatgg
ctggtgctgcgtctgcccgatacccgcctggactatcacgcggtcattctgagcattacc
gacattaccaatcgcaagctgatcgagctgtccttgcaggagcgcgaaagcttttggtcc
gacgtggtacgcaccgtgccggaccacctgtatgtgcaggatgtcaccagccagatgatg
attttcagcaatcaccatctgggccacaccctgggctacaacgccgccgagctcaagcaa
atgggcgcttatttctgggagctgctgctgcaccccgacgacgccgggcactatcacgaa
ctgcgccaccagcaacgtcacggcaactatgtgcgccggttgcaatgccagttgcgcttt
cgtcatcgcagtggcgtctggcgcagttttgagattcgcgaacaggctctggccctgggt
accggggagcaggtaacgcggattgtcggggttgccaaagacatcaccgaccagatcgag
gccagcgaatcgctgcgcgacagtgagcagcgctaccggatgctggcggaaagcatcagt
gatgtgattttctccaccgacagcaggttatgcctgaattacgtcagtccgtcggtacag
actgtgctgggctacgacgcgcaatgggtgttcaacaatggttggcaatcgaccatcgcc
aatccgcaacaactggcgggtatctacagcctgctggcgcgggtcagcgctgcgctggac
acccccgagcaactggcgcccctgcgcactcaagtgcaaacccaggtgttcctgctcgac
tgcttgcgggctgatggacgcaaaatccccatcgagctgcgtctggtactggtgtgggac
gagagcaatacgttcgagggcatcctcggcgttggccgcgatatcagtcagcagcgcaac
gcagaaaaagacctgcgaatggcggctacggtattcgaacactcgacctcggcgatcctg
ataaccgacccggccggctatatcgtccaggccaatgaggcctttagccgggtcagcggt
tacgccgtagcgcaagtgctcgaccagttgccaagcatgctgaccgtggatgaacagcaa
caggcgcatctgcgttacgtgatcaagcaactcaatcagcaccgctcatgggagggcgag
gtgtggctcaaacgccgcagcggcgaacactacccggcatgggtcgggatcaccgcggtg
ctggacgatgaaggcgacctggccagctacgtgtgttttttcagtgacatcagcgaacgc
aaggccagtgagcagcgaatccaccgcctggcctattacgatgccctgacccacctgccc
aaccggacactgtttcaggatcgcctgcacaccgcactgcaacagggcgaccggaacaag
tcgtgggtggtcctgatgttcctcgacctcgaccgtttcaaaccgatcaatgactccctg
gggcacgccgccggcgaccgcatgctcaaagacatggcgacccgcctgctggcctgtgtt
gacgacgacgataccgtggcgcgcatgggcggggacgagttcaccctgctcctgcaacca
cgggcaacccgtcaaatggccttgaaccgggccatcagcgtggccgaacagatcctcgcc
agcctggttcaaccctttgtcctcgaaagccgtgaattcttcgtcacggccagtatcggc
atagccctgagcccgcaagacggaaacgaactcagccagttgatgaaaaacgccgatacg
gcgatgtatcacgccaaagagcgcggcaagaacaacttccagttctatcaggccgacatg
aacgccagcgccctggaacgcctggaactggaaagcgatttgcgccatgccctggagcag
gaagaattcgtactctattaccagccgcaattcagtggcgacggcaaacgcctgaccggg
gttgaagcactgctgcgctggaatcacccgcgccgcggactggtgccgcccggggatttt
atcccggtgctcgaagagctgggcctggtggtcgacgtcggtgactgggtgctggccgca
gcctgtcgccaactcaaacactggcatcaggccaaggtgcgggtgcccaaagtctcggtc
aatatctcggcgcgccagttttcggacggccagctgggcaaccggattgccaacatcctc
aaggaaacgggcctgcccccggcgtgtcttgagctcgagctgaccgaaagcatcctgatg
cgcgaagtcagcgaggcgctgcaaattctggccagcctaaaaaatctcggcctgagcatt
gccgtcgacgacttcggcaccggctattcatcgctcaactacctcaagcaattcccgatc
gacgtactgaaaatcgaccgtacctttgtcgacggtttgccatgtggcgagcaggacgcc
cagattgcccgggccattattgcaatggcccacagcctgaacctggcggtcatcgccgaa
ggcgtcgagacccacgaacagctggttttcctgcgcgagcacggctgcgacgaagtccag
ggctacctgctgggacgaccgctgccggcacaccagttagagaaacagttactggccaag
cagcggcacactgccagtgatgaattacccatttga
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