Pseudomonas fragi: AV641_03920
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Entry
AV641_03920 CDS
T04285
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pfz
Pseudomonas fragi
Pathway
pfz02010
ABC transporters
pfz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AV641_03920
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
AV641_03920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_03920
Transporters [BR:
pfz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
AV641_03920
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6381
FlpD
Motif
Other DBs
NCBI-ProteinID:
AMB78276
LinkDB
All DBs
Position
complement(839634..841259)
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AA seq
541 aa
AA seq
DB search
MFKHAVIPFLVGASLLASAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETIYNR
LSQFERGGTNVEPGLATSWDISPDNLTYTFHLRDGVKFHTTPYFKPTRDFNADDVLFTFN
RMLDKDMPFRKAYPTEFPYFTDMGMDKNIAKVEKIDDKTVKFTLNTVDAAFIQNMAMHFA
SIGSAEYADKLLKEGKPSDINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNL
IFAITTDPSVRIQKLKKNECQVTIYPRPADLAALKADKDLQMPEKPGFNVGYIAYNVMDK
IKGSNEPNPMALLKVRQALDMAVNKQQIIDSVYQGAGQLAVNGMPPTQWSYDDTIKDAPY
NPEKAKELLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWSKIGIKAKIMTYEW
GEYIKRSKGGENGAMLIGWSGDNGDPDNWLGTLFGCDAIEGNNFSKWCNPEFDKLIKTAK
ATTDVAERTKLYKQAQHLLKEQVPMTPIAHSTVYQPMRSTVQDFKISPLGLTSFYGVGIS
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacacgcggtcattccgtttctagtgggcgccagcctgctcgccagtgcacct
ttcgcccaggcggcgaccaatctggtgttttgctccgaaggcagcccggccggttttgac
ccgggtcagtacaccactggtactgacttcgatgcatcagcagaaaccatctataaccgt
ctgagccagttcgaacgtggaggcaccaacgttgagcccggtctggccaccagctgggac
atttcgccggacaacctgacctacaccttccacctgcgcgatggggtcaagtttcacacc
accccttatttcaagcctacgcgcgatttcaacgccgatgacgtgctcttcaccttcaac
cgcatgctcgataaagacatgccgttccgtaaggcctaccccaccgaattcccttatttc
accgacatgggcatggataaaaacatcgccaaggtggaaaaaatcgatgacaagaccgtc
aagttcacgctgaacacggttgatgctgcgtttatccagaacatggcgatgcactttgca
tccataggctctgccgagtacgccgacaaactgctcaaggaaggcaagccttccgatatc
aatcaaaagccgatcggtaccgggccttttgtattcaagagctaccagaaagactccaac
atccgctacaccggcaacaaggattactggaagcctgaagacgtcaaaatcgacaacctg
atcttcgccatcaccactgacccgtcagtgcgcatccagaagctgaaaaagaacgaatgc
caggtcaccatttacccgcgcccggctgacctcgcggcacttaaagccgacaaagacctg
cagatgcccgaaaagcctgggttcaacgtcggctatatcgcttacaacgtcatggacaag
atcaagggcagcaacgaacccaacccgatggccctgctcaaggtgcgacaggcactggac
atggcggtaaacaaacagcaaatcattgattcggtatatcagggggcggggcaattggcg
gttaacggaatgccgcccacccagtggtcttatgacgacacgatcaaggacgcgccctac
aaccctgagaaagccaaagagctgctcaaggaagcaggcatcaaggaaggcaccgaaatc
accctgtgggccatgccggttcaacgcccctacaaccccaacgccaagctgatggctgaa
atgctgcagtcggactggagcaagattggcatcaaggccaagatcatgacctacgaatgg
ggcgagtacatcaagcgttccaagggcggtgaaaacggtgcgatgctgattggctggagc
ggcgacaacggtgacccggacaactggctcggtacgctgttcggttgcgatgccattgaa
ggcaacaacttctccaagtggtgcaatccagagttcgacaagctgatcaagactgccaag
gccaccaccgacgtggctgagcgcaccaagctgtacaaacaggcgcagcaccttctcaaa
gagcaggttccgatgacacctatcgcccactcgacggtgtatcaaccgatgcgcagcacc
gtccaggacttcaaaatcagcccccttggcctgacgtccttctacggcgtaggcatcagc
aaataa
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