Pseudomonas fragi: AV641_04330
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Entry
AV641_04330 CDS
T04285
Name
(GenBank) porin
KO
K07267
porin
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_04330
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_04330
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Ortholog
Paralog
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AMB78354
LinkDB
All DBs
Position
complement(925737..927032)
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AA seq
431 aa
AA seq
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MCSKSSLAVCVAATAFAHHALAADTPAAPACAQYEKTLTRAELSFKNVPVCARINPELWG
LRKELAEHGIGFTATSYNGYTYDVLGHNGKPQVYNGQNPSYNTSVNLYLTYDLTRIGFAN
DAQLTLSGNWVDSTYTPANPRVKTMSVFAINQSFFDHQLELEYGFIPGVRLFYGMALGGS
ASTAALGPSSVVPFQVGMSATEPTPTFNVIVRDPSLHFYNSTAVTRSVSPEGIQKDIDLN
PSGFRLSVQDARALFINEAGYKQAASPTTNGMWLRAGAMYNSSEYTEFLSTRKSDNNYGV
YLAETVQVSKPYGDARGWYLDSKIDYSPDSVNAINKAFQISAFNIGPFASRPADMAAVGL
TKSYYSDDLRKATRAYGQESAPYTLAVTASYAARLIPGVYLISGLTYTKNPVFTPIHSDA
LLWQESLNFLF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccaagtcttcgttagccgtctgcgttgccgcgacagcctttgctcatcacgcg
ctggccgctgacactccagcagcgccagcgtgcgcgcaatacgaaaaaaccctgacccgc
gccgaactgtcattcaagaacgtgccggtttgtgcacgcatcaaccccgaactgtggggg
ctgcgcaaggaactggccgagcacggcatcggcttcaccgccacctcgtacaacggctac
acctatgacgtgctgggacacaatggaaaaccccaggtgtacaacggccagaaccccagc
tacaacacctcggtcaatctgtacctgacctacgacctgacccgcatcggttttgccaac
gatgcccagctgacgctgtcgggcaactgggtggactcgacctacaccccggccaaccca
cgggtcaaaaccatgtcggtgtttgccatcaaccagtcctttttcgaccaccagctggag
ctggaatacggctttatccccggtgtgcggttgttctacggcatggccctgggtggcagt
gcgtccaccgccgctctggggcccagcagtgtggtgccgttccaggtcgggatgtccgcc
accgagccgacgcccaccttcaacgtcatcgtccgcgacccgtcgctgcacttttacaac
agtaccgccgtgacccgcagcgtcagccccgaaggcattcaaaaagacatcgatctcaac
cccagcggctttcgcctgagtgtgcaggatgcccgcgccctgttcatcaacgaggccggc
tacaaacaggccgcctccccgaccaccaacggcatgtggctgcgggccggagcgatgtac
aacagcagtgagtacaccgagtttttgagcaccaggaagtcggacaacaactacggggtg
tatctggccgaaacggtgcaggtcagcaagccctacggcgatgcacggggctggtacctg
gacagcaaaatcgattactcccccgactcggtcaacgccatcaacaaggcattccagatc
agcgccttcaacatcggcccgttcgccagccgccccgccgacatggccgccgtgggcctg
accaaaagttactacagcgacgatttacgcaaagccacccgggcctacggccaggaaagc
gcaccctataccctggccgtgaccgcctcctatgccgcccggctgatccccggggtgtac
ttgatcagcggcctgacctacaccaaaaacccggtatttaccccgattcattccgatgcc
ctgttgtggcaggaatcgctgaacttcctgttttaa
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