Pseudomonas fragi: AV641_04860
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Entry
AV641_04860 CDS
T04285
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_04860
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_04860
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AMB78444
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All DBs
Position
complement(1048162..1050198)
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AA seq
678 aa
AA seq
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MSAPAFPRNLRRLRLTPLATALLIASPAYALELQPQVITGNPLGSSQLASPTTVLEGDDL
TLQQQGSLGETLNKQPGVSSSYFGPGASRPIIRGLDGDRIRILRNGVGALDASSLSYDHA
VPLDPVNVERIEIVRGPAALLYGGNAIGGVVNTFDNRIPTEAIDGIHGAGELRYGGAATT
RSSAGKLEAGDGTFALHLDANAREFNDLKIPGEARSRHAPQSDDDDSKRGRLGNSNGRQD
GGALGGSYTWDDGYAGLSYSTYDANYGSPAEQDVRIRMKQDHYAFASEIRNLQGPFSALK
LNAGYTDYEHREIEGGEVGTTFKNKGYEARVEARHLPLGPLNGVIGAQVNRNEFSALGEE
AFVPQTDTNSGALFILEELQATDRLKLSLGGRLEHTVVDPDAKGNERFSAADSSKSFTAA
SLSSGAVFTLTPIWSLAATLGYTERAPTFYELYANGAHVATGTYEVGNASLSKEKAVSSD
LALRFDNGTHKGSFGVFYSHFSNYIGLLGTGRTLNEEGQPDADGIPEYTYSGVRARFTGF
EARDHWTLGESAYGKFALELSGDYTRATNLDTGEALPRIAPLRLSSGLLWELDRWQARID
VEHASNQGRVPANESGTDGYTTLGASAGYHFDVGSSQWLAFVKGDNLTNQTVRYASSILR
DIAPAPGRGIEVGLRTTF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccctgctttcccacgtaacctgcgacgcctgcgcctgacgccgctggccacc
gcactgctcatcgcctccccggcctatgccctcgaactgcaaccccaagtgattaccggc
aatcctctgggtagcagccagctggcctcgccgaccacggtgctggagggcgacgacctg
accctgcaacagcaaggcagcctgggggaaaccctgaacaaacagcccggcgtgtcttcg
tcctacttcggcccgggcgccagccgaccaatcattcgcggactggatggcgaccggatc
cgcatcctgcgcaatggtgtcggcgcgctggatgcctcgtcgctgtcatacgaccacgcg
gtgccactggacccggtcaatgttgagcggatcgaaatcgtccgtggcccggcggctctg
ctctatggcggcaatgccatcggcggcgtggtcaacaccttcgacaaccgcatcccgact
gaagccatcgacggaattcatggcgccggtgaactgcgttatggcggcgccgcaaccacc
cgcagcagtgcaggcaaactggaagctggcgatggcactttcgccttgcacctggatgcc
aacgcccgcgagttcaatgacctgaaaatcccgggcgaggcccgcagccggcacgccccg
caaagtgacgacgacgatagtaaaaggggccgcctgggtaacagtaacggccgtcaggat
ggcggtgccttgggcggttcctacacctgggatgacggttacgccgggttgtcctacagc
acttacgacgccaattacggctcgcctgcagagcaggacgtacgcatccgcatgaagcag
gaccattacgctttcgcctcggaaatacgcaacctgcaagggccgttcagcgccctgaaa
ctgaatgccgggtacaccgattacgagcatcgcgaaatcgaagggggggaagtgggtacc
accttcaagaacaagggctacgaagcccgggtcgaagcccgtcacctgccgctcgggccg
ttgaacggggtgatcggcgcgcaggtcaatcgcaacgaattctcggcgctgggcgaggaa
gctttcgtgccgcagaccgacaccaacagcggcgcgctgtttattctcgaagaactgcag
gccactgacaggctgaaactcagcctcggcgggcgcctggaacataccgtggtggacccg
gatgccaagggtaacgagcgtttttctgccgctgacagttccaaaagcttcaccgccgcc
agcctgtcgtcaggcgccgtgtttaccctcacccccatctggtcgctggccgccaccctc
ggctacaccgaacgcgcaccgaccttctacgagctttacgccaacggtgcccacgttgcc
accggcacctatgaggtgggcaacgccagtctgtccaaagaaaaagccgtgtccagcgac
ctggccctgcgctttgacaacggcacccacaaaggcagcttcggcgtgttttacagccac
ttctccaattacatcggcctgctgggtacaggtcgcaccctgaacgaagaaggtcagccc
gatgcggacggcataccggagtacacctactccggagtacgggctcgtttcacaggtttc
gaagccagggatcattggacgcttggggaaagtgcctacggcaagttcgcacttgaactg
tcgggtgactacacccgcgccaccaacctcgacaccggtgaagccttgccacgaatcgcc
ccgctgcgcctgagcagtggcctgctgtgggagctggatcgctggcaggcacggatcgat
gtcgaacatgccagcaatcaggggcgagttccggccaatgagtccggtaccgacggctac
accaccctgggcgccagtgccggctatcactttgatgtgggcagcagccaatggctggcg
ttcgtcaaaggcgacaacctgaccaaccagacagtgcgttatgccagctcgattttgcgt
gatattgcccctgctccggggcgagggatagaggtcggcctgcgtaccaccttctag
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