Pseudomonas fragi: AV641_06375
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Entry
AV641_06375 CDS
T04285
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfz03400
]
AV641_06375
DNA repair and recombination proteins [BR:
pfz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AV641_06375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_16
ResIII
TrwB_AAD_bind
AAA_30
AAA_10
T2SSE
AAA_7
Zot
Hydrolase
CbiA
AAA_18
AAA_19
SRP54
P-loop_TraG
nSTAND3
AAA_6
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AMB78716
LinkDB
All DBs
Position
1361120..1362592
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AA seq
490 aa
AA seq
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MPDLSALVLGADLAGQPVAQSLRLANRHGLVAGATGTGKTVTLQRLAEQFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKIAERIAGMPWLDYQPKAYPVTLWDIQGKTGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLRDNPQVLGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPTSDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFAGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPADLPDTVLAQLGLRIQHGLRAFTSKEQRSLRAVADGFRPNPAFDALAVLTEL
GTGEALVGMLEEKGTPAMVQRVLIAPPQSRIGPLTEAERAALIVGSPLQGRYDKPIDRES
AYEVLLARKGVAPQEQVKPQEPGLLDQAGDFLGSTAGKALQSMARQAAGQMGRQLVRGLL
GSLLGGSKRK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgccggacttatctgctcttgttcttggtgctgaccttgcgggtcagcccgtagcccag
tctttgcgcctggcaaaccgtcatggcctggtggcgggcgccacggggacaggtaaaacc
gtgacccttcagcgcctggctgaacagttcagcgatgctggcgtggctgtatttgccgct
gacatcaagggcgatctttgtgggctgggtgcggccggcaaccctcagggcaaaattgcc
gagcggattgccggcatgccatggctcgattatcagccgaaggcgtatccggttacgttg
tgggacatacaaggcaagaccggtcatccattacgcacaacattgagtgaaatgggaccg
ctgctactgggcagtctgctggagttgacggacagccagcagtcggccctgtatgccgcg
ttcaaagtggcagatcgcgagggtttgctgctgcttgatctaaaagacctgaaagctttg
cttaatcatctgcgcgacaacccccaggtgctgggcgatgacgcggctttgatgaccacc
ggttccagccaggccctgctgcggcgcctggcaacacttgaacagcagggcgccgaggcc
ttgttcggcgagccggcgctgcaactggaagacattctgcagccgaccagtgacggtcgc
ggccggattcacctgctcgatgccagtcgcctggtgcatgaagcgcccaaggtttacgcc
acgttcctgttgtggctgttggcggagctttttgaacagttgccggagcgcggggatgcc
gacaagcctttgctggcgctgtttttcgatgaggcccatttgctgtttgccgggacgccc
aaagcattgcaggaccgccttgagcaagtggtacgtctgattcgttccaaaggtgttggt
gtgtactttgtaacgcaatcgccagcggacttgccggacactgtgctcgcgcaactgggt
ttgcggattcagcatggactgcgggcttttacctctaaagagcagagatcgttacgggct
gtagccgacggatttcggcctaacccggctttcgatgcgctggcggtgctgaccgagttg
ggcaccggcgaagcgttggtgggcatgcttgaagaaaaaggcacgccggccatggttcag
cgagtattgattgcaccgccgcaatcgcggatcggcccgctgaccgaggctgagcgggcg
gccttgattgtcggttcgccgttgcaagggcgctatgacaaaccgattgaccgggagtcg
gcctacgaagtgttgctggcccgcaagggcgtagcaccgcaggagcaagtcaagccacag
gaaccgggtcttctggatcaggccggggacttcctgggctcaacggctggcaaagcattg
caatccatggcgcgtcaggcggcgggccagatggggcggcagttggttcgcgggttgctg
ggctcattgctgggtggcagcaaacgcaagtag
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