Pseudomonas fragi: AV641_07030
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Entry
AV641_07030 CDS
T04285
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00071
Fatty acid degradation
pfz00280
Valine, leucine and isoleucine degradation
pfz00310
Lysine degradation
pfz00362
Benzoate degradation
pfz00380
Tryptophan metabolism
pfz00410
beta-Alanine metabolism
pfz00640
Propanoate metabolism
pfz00650
Butanoate metabolism
pfz00907
Pinene, camphor and geraniol degradation
pfz00930
Caprolactam degradation
pfz01100
Metabolic pathways
pfz01110
Biosynthesis of secondary metabolites
pfz01120
Microbial metabolism in diverse environments
pfz01200
Carbon metabolism
pfz01212
Fatty acid metabolism
Module
pfz_M00087
beta-Oxidation
pfz_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AV641_07030 (fadB)
00650 Butanoate metabolism
AV641_07030 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AV641_07030 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AV641_07030 (fadB)
00310 Lysine degradation
AV641_07030 (fadB)
00380 Tryptophan metabolism
AV641_07030 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AV641_07030 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AV641_07030 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AV641_07030 (fadB)
00930 Caprolactam degradation
AV641_07030 (fadB)
Enzymes [BR:
pfz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AV641_07030 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AV641_07030 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AV641_07030 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AV641_07030 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMB78836
LinkDB
All DBs
Position
1487546..1489693
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSAFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMADSARIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDAL
KVGAVDAVVTLDKLGAAALDVIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASQCLIGLFLNDQEL
KKKAKAYDKIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVR
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEEDKRGKQ
KKVVDSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPLFRGGALRYIDSIGVAQFVALADQYAELGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttacggctcttgaaagtggcatcgtcgaactc
aagttcgatctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaattg
cgtcaggcagtggatgcgatcaaggcagatgcttcggtcaagggtgttatcgtttccagc
ggcaaagacgtgtttatcgtcggcgcagacatcaccgaattcgtcgaaaatttcaagttg
ccggatgctgagctgatcgcgggtaacctcgaagccaacaaaatcttcagtgctttcgaa
gacctcaatgtacctaccgttgcggccatcaatggcatcgcgttgggtggcggtctggaa
atgtgcctggcagcggacttccgcgtcatggccgacagcgccaggattggcctgcctgaa
gtaaaactgggcatctacccgggcttcggcggcaccgtacgtttgccgcgtctgatcggc
gttgataacgctgttgaatggattgcttcgggtaaagaaaaccgcgctgaagacgccctg
aaagtcggcgccgttgatgctgttgtcaccctggacaaactgggtgcagctgcgctggac
gtgatcaagcgcgccatcagtggcgagctggactacaaggccaagcgccagccaaagctt
gaaaaactcaagctgaacgcaattgaacaaatgatggctttcgaaaccgccaaaggtttc
gtcgccggccaggccggaccaaactacccggccccggttgaagcgatcaagactatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagttgaagccgcaggtttcgccaaa
cttgcaaaaacatcggcttcgcaatgcctgatcgggttgttcctcaacgaccaggaattg
aagaaaaaggccaaggcctacgacaagatcgccaaagacgtgaagcaggcagccgtactc
ggcgctggcatcatgggcggcggtattgcctatcagtcggcttccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggcatcgagcaaggtctggcagaagccgccaagctg
ctggtaggtcgcgttgataaaggtcgcatgaccccggcgaaaatggccgaagtgctcaac
ggtattcgtccgaccctgtcttacggtgatttcggcaacgtcgacctggtggtcgaagct
gtagtcgagaacccgaaggtcaagcaggccgtactggctgaagtggaaaaccacgtccgc
gaagacgcgattctggcgtccaacacttcgactatctccatcagtttgctggccaaggcc
ctcaagcgtccggagaactttgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtcattcgtggcgagaaatccagcgacctggctgtagcaaccaccgttgcc
tacgccaagaaaatgggtaaaaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaggctggtcagcgccggtgtcgac
tttgtgcgcatcgacaaagtgatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgtgacgtgatggctgaaggcttc
cctgatcgcatgaaagacgatcgccgctcggcgattgacgctctgtacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaagaagacaagcgcggcaagcag
aagaaagtcgttgattccagcgtacttgaagtgctcaagccgattgtctacgagcagcgc
gacgtgactgacgaagacatcatcaactggatgatgatcccgctgtgtctggaaaccgta
cgctgcctggaagacggcatcgttgaaactgcggccgaggccgatatgggtctggtttac
ggcattggcttcccgctgttccgtggcggcgcattgcgctacatcgactcgatcggtgtt
gcacagttcgtggccctggctgatcagtacgctgaactgggcgcgctgtaccacccgact
gcgaagctgcgcgagatggccaagaacggtcagagcttcttcggttaa
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