Pseudomonas fragi: AV641_07235
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Entry
AV641_07235 CDS
T04285
Name
(GenBank) hypothetical protein
KO
K11901
type VI secretion system protein ImpB
Organism
pfz
Pseudomonas fragi
Pathway
pfz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AV641_07235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfz02044
]
AV641_07235
Secretion system [BR:
pfz02044
]
Type VI secretion system
Imp/Vas secretion system core components
AV641_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
AMB78869
LinkDB
All DBs
Position
1538375..1538887
Genome browser
AA seq
170 aa
AA seq
DB search
MSSTASSQKFINRNRAPRVQIEYDVELYGAEKKVEIPFVNGVFADLSGSNTQGLPSVADR
KFLDIDVDNFDERMSAIAPALKFSVNNELTGEGQLPVQLDIQRMDDFSPGSIARNIEPLR
KLLEARNQLSNLLTYMDGKSGAEQLVAQLLDDPALMNSLLQQAKPAVPAE
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcactgcaagcagtcaaaaatttataaatcgcaatcgtgctccgcgggtccag
attgaatatgacgtcgaactctatggcgccgaaaagaaagttgaaatcccttttgtcaat
ggcgtgtttgccgatctttccggttccaatacccaggggttgccctcggtggccgatcgc
aagtttctggacattgacgtcgacaactttgatgagcgcatgagtgccattgcgccggcg
ttaaagttcagcgtgaataatgaactgaccggtgaagggcaactgccggtccagctggat
attcagcgcatggatgatttcagcccgggttccatcgcccgcaatatcgagccgttgcgc
aagttgctggaggcccgtaatcaactttccaacttgctgacctatatggacggcaaaagt
ggtgccgagcaactggtcgcccaactgctcgacgatccggcattgatgaactcattgctg
caacaggccaaacccgccgtccccgctgaataa
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