Pseudomonas fragi: AV641_07240
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Entry
AV641_07240 CDS
T04285
Name
(GenBank) EvpB family type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
pfz
Pseudomonas fragi
Pathway
pfz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AV641_07240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfz02044
]
AV641_07240
Secretion system [BR:
pfz02044
]
Type VI secretion system
Imp/Vas secretion system core components
AV641_07240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
DUF6781
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
AMB78870
LinkDB
All DBs
Position
1538898..1540388
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AA seq
496 aa
AA seq
DB search
MPATEQLQSQDSQATTLEADSFSSLLQREFKPRSEQASDALHTAVQTLAEQALGSVHLIA
DDTLSTIEALIAAIDSKLSSQVNAILHHEAFQKLESAWRGLHHLVSNTETDEKLKIRFIN
ISKAEVARELKKFKGAAWDQSPLFKKIYEHEYGQFGGEPFGALIADYYFDNSPPDVELLA
SMAKIAAAAHAPLISAADPGALLMDSWQELANPRDLGKIFQTPEHAAWRNFRSSEDSRYV
GLTLPRFLGRIPYGAKTAPVEDFNFEEVTRGDSANYLWVNSAYAMGLNINQSFKQFGWCS
QIRGIESGGAISGLPVHTYPSEDGGVDMTCPTEIAISDRRELELANNGFMPLVHCKNSSV
AAFIGAQSLHSPQQYDDPDATANARLAARLPYLFATCRFAHYLKCIVRDKIGSFKERAEI
ENWLNGWINQYVDLNPATATDADKARKPLAAAEVVVEEDEGNPGFYRAKFFLRPHYQLEG
LTVSLRLVSKLPSVKA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaactgaacagcttcaaagtcaagatagccaggccaccaccctggaggccgac
agttttagcagcttgctgcaacgggagttcaaaccccgcagcgaacaggccagtgacgcc
ctgcacaccgcggtgcaaaccctggccgagcaggcactgggttctgtgcacctgattgcc
gatgacaccctgagcaccattgaagcgctcatcgccgccatcgacagtaaactttcaagc
caggtcaatgcgatcctgcaccatgaagcctttcaaaagctggagtcggcgtggcgcggt
ctgcatcacctggtgagcaataccgagaccgatgaaaagctcaagatccgctttatcaac
atctccaaggccgaggtggcccgtgaacttaagaagttcaaaggcgcggcctgggatcag
agcccgctgttcaagaagatttatgagcatgaatacgggcagtttggcggcgagcccttc
ggtgccttgatcgcagactactacttcgataacagcccgcccgatgtcgagctgctggcc
tccatggccaaaattgccgcggcggcccatgcgccgttgatcagtgcggccgaccctggc
gccctgttgatggactcctggcaagagctggccaacccgcgggacctgggcaaaatcttc
cagaccccggagcatgccgcctggcgcaacttccgcagctcggaagactcgcgctatgtg
ggcctgaccctgccgcgtttcctggggcgaattccctacggcgccaaaaccgcaccggtg
gaagatttcaactttgaagaagtgacccggggcgattcggccaactacctgtgggttaac
tccgcctatgccatgggccttaacatcaaccagtccttcaagcagtttggctggtgttca
cagatccgtggtatcgagtccggcggcgccatcagcggcctgccggtgcacacttacccc
agcgaagacggcggggtggacatgacctgcccgaccgaaatcgccatcagcgaccgccgt
gaactggagctggccaataacggtttcatgccgctggtgcactgcaagaacagctctgtg
gccgcctttatcggtgcccagtcactgcatagcccgcagcaatacgacgacccggatgcc
acggccaacgcccgactggccgcgcgcctgccttatctgttcgccacgtgccgttttgcc
cactatctgaaatgcatcgtgcgcgacaagatcggctcgtttaaagagcgcgcggaaatt
gaaaactggctcaacggctggatcaatcaatacgttgaccttaatccggccactgccacc
gatgccgacaaggcgcgtaaacccctggcggcagccgaggtggtggtggaagaagatgaa
ggcaatccagggttttaccgggccaaattcttcttgcggccccactaccaactggaaggt
ttgactgtttcattgcgactggtttccaagttgccttcggttaaagcataa
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