KEGG   Pseudomonas fragi: AV641_07295
Entry
AV641_07295       CDS       T04285                                 
Name
(GenBank) type VI secretion protein
  KO
K11893  type VI secretion system protein ImpJ
Organism
pfz  Pseudomonas fragi
Pathway
pfz02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    AV641_07295
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfz02044]
    AV641_07295
Secretion system [BR:pfz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AV641_07295
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: AMB78881
LinkDB
Position
1552084..1553424
AA seq 446 aa
MFSNDRVLWSEGMFLQPQHFQQQQRHQQAQLVQGLLALQSHAWGFTALKVDAAQLALGYV
QLLECAGILPDGTLFNLDTEQLARTRFVVPEGARELEVVLALPAPGISTVEVSRDSGPDS
LARYRLVEAPALDSSAPDTGEATLQLARLNLRLAGKRDVARSHVYLDVLRIAERSPGGQV
SLDEGFIAPVLNWRLARPLVSFVDDFLSRVKQRGYMLATNMGVPGLGGVAEVQHFLMLQT
INRAESMLGHLASYPGLHPEVLYRELLGLAGELAIFSESSKRPKSYPVYRHDRLGECFAP
IMDDLAYTLSAQAGTDVIPLVLHEREHGIRFAAVLDSSLYASARFVLAVRAQVPDDELRK
VFPTRLKIGPAERVADLVDLQLPGLGVSVLPAAPRELPYYAGFSYFELQSDHPLWQELNT
GAGFGLHLAGDFPGLQLAFWAIKDPQ
NT seq 1341 nt   +upstreamnt  +downstreamnt
gtgttcagcaatgaccgggtgctgtggtcggaagggatgttcctccagccgcagcatttt
caacagcaacaacgccaccagcaggcgcaactggtgcagggcctgctggctttgcaaagc
catgcctggggctttaccgcgctgaaggtcgatgcggcccaactggccctgggctatgtg
cagttactggagtgcgccggcatcttgcccgacggcacactcttcaatctggacaccgag
cagctggcccgcacccgctttgtggtgcccgagggcgcacgggaactggaggtggtcctg
gccttgcccgcgccgggcatctcgactgtcgaagtaagccgtgacagcggccccgacagc
ctggcgcgctaccgtctggtggaagcgccggccctggatagttcggcccccgacacgggc
gaggcgaccctgcaactggcgcggctgaacctgaggctggcgggcaagcgcgacgttgca
cggtcccatgtctatctggacgtgctgcgcatcgccgagcgcagccccggtggccaggtc
agtctggatgagggctttatcgcgccggtgttgaactggcgtctggcccggcccctggtc
agctttgttgacgactttctaagccgggtcaagcagcgtggctacatgctggcgaccaat
atgggggtgccggggctgggcggcgtggcggaggtccagcattttctgatgctgcaaacc
atcaaccgggccgagtccatgctgggtcatctggcgagctatccgggcttgcaccctgag
gtgctctaccgcgagttgctggggctggccggggagctggcgatattttctgaaagcagt
aaacggcccaaatcctatcctgtctatcgccacgaccggcttggcgaatgcttcgccccg
atcatggacgatctggcctataccctcagcgcccaggccggtaccgatgtcattcctctg
gttttgcacgagcgcgaacatggtatccgctttgccgccgtgctcgactcaagcctgtac
gccagcgcccgctttgtgctcgcggtgcgcgcccaggtgccggacgatgaactgcgcaag
gtgttcccgacccgcctgaaaattggccctgcagagcgggtcgccgacctggtggacctg
cagttgcccgggcttggcgtcagtgtcttgccggccgctccgcgggaactgccctattac
gcgggcttcagctatttcgagctgcaaagcgatcatccgctgtggcaggaactcaacacc
ggtgccggtttcggactccatctggccggtgacttccccggcttgcaactggccttctgg
gcgatcaaggaccctcaatga

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