Pseudomonas fragi: AV641_07295
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Entry
AV641_07295 CDS
T04285
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pfz
Pseudomonas fragi
Pathway
pfz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AV641_07295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfz02044
]
AV641_07295
Secretion system [BR:
pfz02044
]
Type VI secretion system
Imp/Vas secretion system core components
AV641_07295
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Ortholog
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Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AMB78881
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Position
1552084..1553424
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AA seq
446 aa
AA seq
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MFSNDRVLWSEGMFLQPQHFQQQQRHQQAQLVQGLLALQSHAWGFTALKVDAAQLALGYV
QLLECAGILPDGTLFNLDTEQLARTRFVVPEGARELEVVLALPAPGISTVEVSRDSGPDS
LARYRLVEAPALDSSAPDTGEATLQLARLNLRLAGKRDVARSHVYLDVLRIAERSPGGQV
SLDEGFIAPVLNWRLARPLVSFVDDFLSRVKQRGYMLATNMGVPGLGGVAEVQHFLMLQT
INRAESMLGHLASYPGLHPEVLYRELLGLAGELAIFSESSKRPKSYPVYRHDRLGECFAP
IMDDLAYTLSAQAGTDVIPLVLHEREHGIRFAAVLDSSLYASARFVLAVRAQVPDDELRK
VFPTRLKIGPAERVADLVDLQLPGLGVSVLPAAPRELPYYAGFSYFELQSDHPLWQELNT
GAGFGLHLAGDFPGLQLAFWAIKDPQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgttcagcaatgaccgggtgctgtggtcggaagggatgttcctccagccgcagcatttt
caacagcaacaacgccaccagcaggcgcaactggtgcagggcctgctggctttgcaaagc
catgcctggggctttaccgcgctgaaggtcgatgcggcccaactggccctgggctatgtg
cagttactggagtgcgccggcatcttgcccgacggcacactcttcaatctggacaccgag
cagctggcccgcacccgctttgtggtgcccgagggcgcacgggaactggaggtggtcctg
gccttgcccgcgccgggcatctcgactgtcgaagtaagccgtgacagcggccccgacagc
ctggcgcgctaccgtctggtggaagcgccggccctggatagttcggcccccgacacgggc
gaggcgaccctgcaactggcgcggctgaacctgaggctggcgggcaagcgcgacgttgca
cggtcccatgtctatctggacgtgctgcgcatcgccgagcgcagccccggtggccaggtc
agtctggatgagggctttatcgcgccggtgttgaactggcgtctggcccggcccctggtc
agctttgttgacgactttctaagccgggtcaagcagcgtggctacatgctggcgaccaat
atgggggtgccggggctgggcggcgtggcggaggtccagcattttctgatgctgcaaacc
atcaaccgggccgagtccatgctgggtcatctggcgagctatccgggcttgcaccctgag
gtgctctaccgcgagttgctggggctggccggggagctggcgatattttctgaaagcagt
aaacggcccaaatcctatcctgtctatcgccacgaccggcttggcgaatgcttcgccccg
atcatggacgatctggcctataccctcagcgcccaggccggtaccgatgtcattcctctg
gttttgcacgagcgcgaacatggtatccgctttgccgccgtgctcgactcaagcctgtac
gccagcgcccgctttgtgctcgcggtgcgcgcccaggtgccggacgatgaactgcgcaag
gtgttcccgacccgcctgaaaattggccctgcagagcgggtcgccgacctggtggacctg
cagttgcccgggcttggcgtcagtgtcttgccggccgctccgcgggaactgccctattac
gcgggcttcagctatttcgagctgcaaagcgatcatccgctgtggcaggaactcaacacc
ggtgccggtttcggactccatctggccggtgacttccccggcttgcaactggccttctgg
gcgatcaaggaccctcaatga
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