Pseudomonas fragi: AV641_07625
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Entry
AV641_07625 CDS
T04285
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pfz
Pseudomonas fragi
Pathway
pfz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV641_07625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_07625
Transporters [BR:
pfz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AV641_07625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
TOBE_2
AAA_22
nSTAND1
AAA_25
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_29
nSTAND3
Mg_chelatase
AAA
AAA_5
AAA_23
NACHT
ORC-CDC6-like
nSTAND_NTPase5
Rad17
NB-ARC
AAA_30
ATPase_2
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AMB78945
LinkDB
All DBs
Position
complement(1624739..1625728)
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AA seq
329 aa
AA seq
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MSFVSVEHLQKSYSGTPVFSDINCSIAKGEFVTLLGPSGCGKSTLLRCIAGLTPVDGGRI
LLDGEDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVKPDDSHKRVAEVLQL
VELNDFAKRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRNIQ
RELGLTTIFVTHDQEEALVMSDRIFLMNQGRIVQSGNAQTLYAAPVDVFAAGFIGNYNLL
DADTASRLLQRPVNSRIAIRPETLGLSLQGEADTLIRNHSLLGNVIRYRVEVRGVELIVD
VLNRSPADLYPDGQRVALSIDSSTLCEVA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgtcagcgttgaacacctgcagaaatcctattccggaaccccggtcttcagc
gatatcaattgcagcatcgccaaaggcgagttcgtcaccctgctcggcccctcgggctgc
ggcaagtccacgctgctgcgctgcatcgccgggcttaccccggtggacggcggccggatc
ctcctcgatggcgaggacattgtgccgctgagcccgcaaaagcgcgggatcggcatggtg
ttccagagttatgccctgttccccaacatgaccgtcgagcaaaacgtggcgtttggcttg
cgcatgcaaaaagtcaaacccgatgacagccacaaacgcgtggccgaggtgttgcaactg
gtggagctcaatgacttcgccaagcgctatccccatcagctgtcaggcggccagtgccag
cgtgtggccctggcccgatcgctggttacccgccctcgcctattgctgctggatgagccg
ctgtcggcgctggacgctcgtattcgcaagcacctgcgtgagcagatccgcaacattcag
cgcgagctggggctgaccaccattttcgtcacccacgaccaagaagaagcgctggtcatg
agtgaccgcatctttttgatgaaccaggggcgcattgtgcagagcggcaatgcgcaaacc
ctgtacgccgcgccggtggatgtattcgccgccgggtttatcggcaactacaacctgctg
gacgccgacactgccagccgcctgctgcagcgtccggtcaacagccgcatcgccatacgc
ccggaaaccctgggcctgagcctgcaaggcgaggcagacacccttatccgcaaccacagc
ctgttgggcaatgtgattcgctatcgcgtagaggtccgcggtgtggaattgatcgttgac
gtgctcaaccgctctcccgcggatctgtatccggatggtcagcgcgtggcattgtccatc
gatagcagcaccctttgtgaggtagcctga
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