Pseudomonas fragi: AV641_07755
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Entry
AV641_07755 CDS
T04285
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00020
Citrate cycle (TCA cycle)
pfz00190
Oxidative phosphorylation
pfz00650
Butanoate metabolism
pfz00720
Other carbon fixation pathways
pfz01100
Metabolic pathways
pfz01110
Biosynthesis of secondary metabolites
pfz01120
Microbial metabolism in diverse environments
pfz01200
Carbon metabolism
Module
pfz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfz_M00149
Succinate dehydrogenase, prokaryotes
pfz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AV641_07755 (sdhB)
00650 Butanoate metabolism
AV641_07755 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
AV641_07755 (sdhB)
00720 Other carbon fixation pathways
AV641_07755 (sdhB)
Enzymes [BR:
pfz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AV641_07755 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_9
Fer4_7
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
AMB78969
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All DBs
Position
1651891..1652595
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AA seq
234 aa
AA seq
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MLKVSVYRYNPDQDAAPFMQEFQVNTNGKDLMVLDVLALIKEQDEGFSYRRSCREGVCGS
DGMNINGKNALACVTPLSAVVKGNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTKTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRSMLLQSGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtcagtgtttatcgctacaacccggatcaagacgccgcgccgttcatgcag
gaattccaggtcaataccaacggtaaagacctgatggtgctggacgtgctggccttgatc
aaagagcaggacgaaggtttttcctatcgtcgctcgtgccgtgagggcgtttgcggctcc
gacggcatgaacatcaacggcaaaaacgcactggcttgcgttacgccgctgtctgctgtc
gtaaaaggtaacaagttgatcgttcgtcctctgccaggtttgccggttatccgtgacctg
gtcgtcgatatgagcatcttctacaagcaatacgagaaggtgaagccgttcctgcagaac
gatactccggccccggccattgagcgtctgcagtctccggaagagcgcgagaagctcgac
ggtctgtacgagtgcatcctgtgcgcttgctgctcgacttcgtgcccgtccttctggtgg
aacccggacaagttcctgggccctgctgcactgctgcaagcctaccgtttcctggctgac
agccgtgacaccaagaccagcgagcgtctggcttcactggatgacccgttcagcgtattc
cgctgccgcgggatcatgaactgcgtaaacgtgtgtccgaagggcctgaacccgactaag
gccattggtcacgtgcgtagcatgctgctgcagagcggcgtgtga
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