Pseudomonas fragi: AV641_08175
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Entry
AV641_08175 CDS
T04285
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfz03032
]
AV641_08175
03036 Chromosome and associated proteins [BR:
pfz03036
]
AV641_08175
03400 DNA repair and recombination proteins [BR:
pfz03400
]
AV641_08175
DNA replication proteins [BR:
pfz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AV641_08175
Chromosome and associated proteins [BR:
pfz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AV641_08175
DNA repair and recombination proteins [BR:
pfz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AV641_08175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AMB79046
UniProt:
A0A109R7W4
LinkDB
All DBs
Position
1757739..1758035
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEDDI
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctgctttcatccaag
gatgtagagttggctatcaagactatgcttgaacaaatgtcacagtgtctggcgaccggg
gatcgaattgagatccgtggctttggcagcttctcgctgcattatcgcgcgccgcgtgta
ggccgtaacccaaagaccggccagtctgtcagcctcgatggcaagtttgttcctcatttc
aagccgggcaaagagctccgggatcgagttaatgaggatgaggaagacgatatttaa
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integrated database retrieval system
