Pseudomonas fragi: AV641_08540
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Entry
AV641_08540 CDS
T04285
Name
(GenBank) two-component system response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pfz
Pseudomonas fragi
Pathway
pfz02020
Two-component system
pfz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AV641_08540
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV641_08540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfz02022
]
AV641_08540
Two-component system [BR:
pfz02022
]
OmpR family
QseC-QseB (quorum sensing)
AV641_08540
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
DUF6213
Motif
Other DBs
NCBI-ProteinID:
AMB79111
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Position
1841650..1842327
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AA seq
225 aa
AA seq
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MHVLVCEDDELIASGIVAGLTAQGLTVEHVGTAAAARAMLKVAEFDVMVLDLGLPDEDGL
KLLQQLRQQGFELPVLVLTARDSVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVA
GRSVNLIEHGQLSYDPSSRVTLLAGQPVDLSRREQALLQALLHNRGRVLSSEQLKDSIYG
FGDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPADGVGQP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtactggtttgcgaagatgacgaactgatcgccagcggcattgtggccgggctc
acggctcagggcctgacggtggagcacgtaggcaccgcagcagcggccagggccatgctc
aaagtggcggagttcgatgtgatggtgctcgacctcggcctgccggatgaagacggcctc
aagctgttgcaacagctgcgtcagcaaggcttcgagctgccggtactggtgctcaccgca
cgggactcggtgactgatcgggtcgatggcctgcaggccggagccgatgattacctgctc
aagccctttgatctgcgcgagctcgcggcccgtttgcacaccctgttgcgccgggtggcc
gggcgcagcgtcaatctgatcgagcatggtcagctgagctatgaccccagcagccgcgtg
accctgcttgccggtcagccggtggacttgtcacgtcgggagcaggcgctgctgcaagcc
ttgctgcacaaccgtggtcgggtgctgtccagcgagcagctcaaggacagcatctatggc
tttggcgacgagctggagagcaatgccctgaacgtacatatccatcacctgcgccgaaag
ctgggcaatggcattgtcgaaaccgtccgtggcctgggctatcgcctgggcccggccgat
ggtgtcgggcagccatga
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