Pseudomonas fragi: AV641_09020
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Entry
AV641_09020 CDS
T04285
Name
(GenBank) glycogen-branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00500
Starch and sucrose metabolism
pfz01100
Metabolic pathways
pfz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
AV641_09020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfz04147
]
AV641_09020
Enzymes [BR:
pfz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
AV641_09020
Exosome [BR:
pfz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AV641_09020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
GlgB_N
Alpha-amylase
Glyco_hydro_70
DUF5696
Motif
Other DBs
NCBI-ProteinID:
AMB79194
LinkDB
All DBs
Position
1947086..1949311
Genome browser
AA seq
741 aa
AA seq
DB search
MSSNKVPGPGKMAVLPARDDIEALINTRHRDPFAVLGPHPDGEGGQVIRAFLPGALSVKV
VARDSDEVIGTLDSSEVPGLFAGHFADVRGYRLSISWAGGEQTSEDPYSFGPLLGEMDLY
LFAEGNHRDLSSCFGAQVMSVDGVPGVRFAVWAPNARRVSVVGDFNIWDGRRHPMRLRHP
SGVWELFIPRLAPGEAYKYEILGANGILPLKADPVALATQLPPDTASRVASPLQVDWQDA
AWMQSRAEHQKPDAPLSIYELHTGSWQCEVDDIGEVARLYNWHELAERLIPYVQKLGFTH
IELMPIMEHPFGGSWGYQPLSQFAPSARYGSPDDFAAFVNACHVAGIGVILDWVPAHFPN
DTHGLAQFDGTALYEYANPLEGYHQDWNTLIYNLGRTEVHGFMLASALHWLKHFHIDGLR
VDAVASMLYRDYSRKAGEWVPNIHGGRENLEAIEFLRHLNDVVALEAPGALMIAEESTAW
PGVSQSTQQGGLGFAYKWNMGWMHDSLHYIQQDPMYRAHHHNELSFGLVYAWSERFILPI
SHDEVVHGKHSLIDKMPGDRWQKFANLRAYLSFMWAHPGKKLLFMGCEFGQWREWNHDQQ
LDWYLLQYHDHQGVQKLVGDLNRLYREEPALHDQDDVAQGFQWLIGDDATNSVYAWLRWS
KAGKPLLVVANFTPVPRPGYRIGVPFSGTWQEVLNSDADTYAGSNYGNGGGVMTQALPSH
GQEVSLALNLPPLGVLILQPT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaacaaggttcctggcccgggaaaaatggctgtgctgcccgcgcgcgacgat
atcgaagcactgatcaacactcggcaccgagacccttttgcggtgttggggccgcacccg
gacggtgagggcgggcaagtgatacgggcatttttgcccggtgccctgagcgtcaaggta
gtggcccgcgactcggacgaggtgattggcacgctggacagcagcgaggtcccgggcctg
tttgccgggcattttgccgatgtccgcggctatcggctaagcatcagctgggccggtggc
gagcagaccagtgaagatccttacagctttgggcctttgctgggggaaatggacctgtat
ctgtttgcagagggtaatcaccgggacttgagcagttgtttcggcgcccaggtcatgagc
gtcgatggcgttcccggtgtgcgttttgcggtgtgggcgccgaatgcgcggcgagtgtcg
gtggtgggggatttcaatatctgggatggccgcaggcaccccatgcgcctgcgccatcca
agcggggtctgggagctgtttatcccgcgtcttgcgccaggtgaagcctacaagtacgaa
attcttggggccaacggtatcttgccgctcaaggctgatccggtggcgctggccacccag
ttgccgcccgatacggcctcccgggtggcctcgccgctgcaggtggactggcaggacgcg
gcctggatgcagagtcgcgctgaacatcagaagccggacgcgccattgtccatttatgaa
ttgcacaccggctcctggcagtgcgaggtcgacgatatcggcgaagttgcgcgcctgtat
aactggcatgaactggcagagcgcctgatcccttacgtacagaaactggggttcacccat
atcgagctgatgccgatcatggaacacccgtttggcggttcgtggggctatcagcccttg
tcccagtttgcgccgagtgcccgatacggttcgccggatgatttcgcagccttcgtcaat
gcctgtcatgtggccgggatcggggtgattctggactgggtgcccgcgcattttcccaac
gatacccatggcctggcgcaatttgacggcacggcgctgtatgaatatgccaacccgctg
gagggctatcaccaggactggaacaccttgatctacaacctggggcgcaccgaagtccat
ggcttcatgctggcctcggcgttgcactggctcaagcatttccatatcgacggcctgcgg
gtggatgcggtggcctcgatgctgtatcgcgattactcgcgcaaagcgggcgagtgggtg
ccgaacattcatgggggccgggaaaacctcgaagccattgagttcttgcgccatctcaac
gacgtggtggccctggaagcccccggcgccctgatgattgccgaagagtccaccgcgtgg
ccgggggtcagtcagagtacccagcagggcggtctgggttttgcctacaaatggaacatg
ggctggatgcatgattcgctgcactacatccagcaggacccgatgtaccgtgcccatcat
cacaacgagttgagctttggcctggtgtacgcctggagcgagcgcttcatcctgccgatt
tcccacgatgaagtggtgcacggcaagcattcactgatcgacaagatgcccggggatcgc
tggcaaaaattcgccaacctgcgggcctatctgagttttatgtgggcgcatccgggcaag
aagttgctgtttatgggctgtgagttcggacagtggcgcgagtggaaccacgatcagcaa
ctggactggtacttgctgcaataccatgaccaccagggggtgcagaagctggtgggtgat
ttgaatcgcctgtaccgcgaagaaccggcgctgcatgaccaggacgatgtggcgcaaggc
tttcaatggctgatcggggatgatgcgaccaacagtgtctatgcctggctgcgctggagc
aaggcgggcaaaccgctgctggtggtcgccaacttcaccccggtgcctcgtccgggatat
cgcattggcgtgccgttttccggtacctggcaagaggtgctcaacagtgatgcggatact
tatgccggttccaactatggcaatggcgggggagtgatgacccaggccttgccaagtcat
ggccaggaggtttcgctggcattgaatctgccgccgctgggggttctgattttacagccg
acgtga
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