Pseudomonas fragi: AV641_10025
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Entry
AV641_10025 CDS
T04285
Name
(GenBank) GntR family transcriptional regulator
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfz03000
]
AV641_10025
Transcription factors [BR:
pfz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
AV641_10025
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GFIT
Motif
Pfam:
FCD
GntR
HTH_DeoR
DUF1611
Motif
Other DBs
NCBI-ProteinID:
AMB79373
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Position
2195667..2196380
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AA seq
237 aa
AA seq
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MSKPGQLVLIALRKMIASGELAAGERLMEIPTAELFGVSRMPVRMAFRTLEQEGLLVRFG
GRGFQVRSVSADDIAGAVEVRGVLEGLAARQTAERGLSAEGRKVLELCLMQGDELFDKGF
VTEDDLEIYHDLNMRFHQVIIEGSHNPAIADALARNDHLPFASVTALAVDRKDMVREYRR
FNYAHMQHHSVFDALVSGQGARAEAIMREHANATLRYAEIFGSAVASERMKVIHRPD
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcccggtcaattagtgctgatcgcactgcgcaaaatgattgcctcaggcgag
cttgccgcgggcgagcgcctgatggaaatccctaccgctgaattgttcggtgtgtcccgg
atgccggtgcgcatggcgtttcgcaccctggagcaggaaggcttgctggtgcgttttggc
ggtcgcggctttcaggtgcgctcggtgagtgccgatgatattgccggcgcggtagaggtg
cgcggtgtgctggaagggttggcggcccgtcagacagccgagcgcgggttgtcggccgaa
gggcgcaaagtcctcgagctgtgcctgatgcaaggcgatgagctgttcgacaagggcttt
gtgaccgaggacgatcttgagatctatcacgatctgaacatgcgttttcatcaggtgatc
atcgagggtagccataacccggcgattgccgatgcgctggcgcgcaatgatcacttgcca
tttgcttcggtgaccgcgctggcggtcgatcgcaaggacatggtgcgcgagtaccggcgt
ttcaactacgcgcacatgcagcaccactcggtgttcgatgccctggtcagtggccagggt
gcccgcgccgaagccatcatgcgcgagcacgccaacgcgactttgcgttatgccgaaata
tttggctcggcggtggccagtgagcggatgaaagtgattcaccgcccggactga
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