Pseudomonas fragi: AV641_10980
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Entry
AV641_10980 CDS
T04285
Name
(GenBank) ABC transporter ATP-binding protein
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
pfz
Pseudomonas fragi
Pathway
pfz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AV641_10980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_10980
Transporters [BR:
pfz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AV641_10980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_16
SMC_N
AAA_29
AAA_22
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_15
DUF87
AAA_33
Myelin_PLP
Zeta_toxin
AAA_23
nSTAND3
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AMB79551
LinkDB
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Position
2431195..2432982
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AA seq
595 aa
AA seq
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MDTHDTAPAKTRVRGPISQILHPVRGRLIVAGLLAAAGAMLTLVPLAGIAHIGKMALADN
GLEPAQVWWALIAGVASLCAGMLLISGAELLAHLADNRITHHLRRALVQRLSSVPLGWFT
SRASGEVKQAMQDDINTLHSLTAHFFTTSGRAAGAVLISLIYLFTMDWRMAIVSILPFPG
FFLFFARAMKASQTNMQAFTAGMGRIDNSVVEFVNGIAVVKSFSTGTRAHSSYREAIDAF
ALAFIGFTRPLVAPMANANAMIAPVTVLGVVLVSGTVFVGLGWIAAPDVLPFALVTPGLC
GPLLLLHYITHDLNHAAGAARRVQALLDTPVLEQPAPGLQQSPKGNEIRFEGVSYGYDSA
RQVLADVSFTLKPGTTTAIVGRSGSGKSTLARLLLRFFDPTQGRITLGGVDLREIETCNL
YRHIGFVLQEVRLIHASVRDNIALGRPSASQQQIEDAARIANIHQRILDLPRGYDSVIGE
DAQFSGGEQQRVSIARAVLLDPPVLVLDEPTAAADAESEVAIQEALSRFARGRTLLVIAH
RLDSIMLADQIIVLDNGIVHEQGRHEELLAGKGLYAHLWAQGGYSQSADLAVSSC
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggacactcatgacacggccccggccaaaaccagggtgcgcggcccgatcagccagata
ctgcatcctgtgcgtggacgcctgatcgttgccggcctgctcgcggcagcgggcgcgatg
ctcacgctggtgccgctggccggtatcgcccatatcggcaaaatggcgttggctgataac
gggcttgagccggcacaggtgtggtgggcgctgattgcaggagtggccagcctgtgcgcc
gggatgctgctgatatccggcgcagaactgctcgcccacctggcggacaaccgcattacc
catcacctgcgccgggcgcttgtgcagcgactcagcagcgtgcccctgggctggttcacc
agtcgggcgtcgggcgaggtcaagcaggcgatgcaggacgacatcaacacattgcacagc
cttaccgcgcatttcttcacgacatcggggcgtgcggccggcgcggttctgatctcgctg
atctacctgttcaccatggactggcgcatggccattgtctcgatcctgccgttccccgga
ttcttcctgttttttgcccgggcgatgaaggccagccagaccaacatgcaggcgttcacc
gccggtatggggcgcatcgataactcggtggtcgagttcgtcaacggcatcgcggtggtc
aagtcattcagtaccggtaccagggcacacagcagctaccgcgaagcaattgatgccttc
gccctggcctttatcggattcacccggcctctggtggctccgatggccaatgccaacgca
atgattgccccggttacggttctcggcgtagtgctggtgtccggtacggtgttcgtgggc
ctgggctggatcgcggcgccggatgtgctgccgtttgccctggtgacgccggggctgtgc
gggccgctgctgttgctgcactacatcacccatgaccttaaccacgcagccggtgctgcc
cggcgtgttcaggccctgctggatacccccgtgctggagcaaccggcccccggcctgcag
cagtcgccaaagggaaacgagatccgcttcgaaggtgtcagctacggctatgacagcgca
cgccaggtactggccgatgtcagcttcacgctcaagcccggcaccaccacagccatcgtc
gggcgctcgggctccggcaagtcgaccctggcgcggctgctgctgcgcttcttcgacccc
acgcaagggcgcatcactctgggcggggtggatctgcgcgagattgaaacctgcaacctc
taccggcatatcggttttgtcttgcaggaggtgcgcctgatccatgccagcgtgcgcgac
aacattgcgctgggcagaccatcggccagccagcaacagatcgaggacgccgcgcgcatc
gccaacatccaccagcgcattctggatttaccccgcggctatgactcggtgatcggtgaa
gatgcgcagttttccggcggcgagcagcagcgtgtgagcatcgcccgcgccgtgctgctc
gatccccccgttctggtgctcgacgaacccacggcagcagccgacgctgaaagcgaagtc
gcaatccaggaagcgttgtcgcgctttgcccgcggccgaaccctgctggtcattgcccac
cggctcgacagcatcatgcttgccgaccagatcatcgtgctcgacaacggcattgttcat
gaacagggccgccatgaagaactgctcgcaggcaaggggctctatgcccacttgtgggcg
cagggtggctattcacaatctgcagatctggcggtgtcgtcatgctga
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