Pseudomonas fragi: AV641_13610
Help
Entry
AV641_13610 CDS
T04285
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_13610
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_13610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AMB80029
LinkDB
All DBs
Position
complement(3022596..3025028)
Genome browser
AA seq
810 aa
AA seq
DB search
MSYAPLRPCLLALTITLSIACPLGAVAGPLANEQSALRAFDLPAAPLGVTLSRIARDSQL
TLSVAPALLQGKTSAPVRGMFTPQQAAERALAGSGLGLNVTQSGALSVYPLAATGTLNLG
ATTVSGRTAEDARGAVDGFVATRSATATKTDTPILEIPQTINVVTADQVQVQGARDLTQA
LRYTPGLSTNGYTDRNTIADEITSRGFAPTLLYLDGAYLPSAGSLGGAPQIDPYTLERIE
VLKGPSSVLYGQNQPGGMINMVSKRPSTEAAHQIKVGTGSFDRYNLAFDFTGPLDEAKTL
SYRLIGVGNTGSEQVDHTEDSRQLLAPSFSWMPDDDTELTLYAQIQRDDALADYQALPAV
GSLYRNSQGNRIDRDTFLGDSKWNDYKRDQYVLGYQFSHAFNEAMTYRQSLSYIDVNDRY
KGFYLNRFVTTPEGISDTHASRTKLDWRQQNSSYSFDNHLQSDFTTGPLQHTLLVGLDYR
DFTRKYQGYNLSGSEIIDLYNPTNYRTTGVPTLTTKWDNSVKQTGFYVQDQIKFDNFILT
IGGRHDWAKVDNNDLLADSREMQNDNKFTGRVGLTYVTSFGLAPYISYTESFLPSVGTAA
PERGGKAFIPQLGKQYEVGVKYQPDDSTLLTASVFQIKQQNVLTGDLQYQEYQIQEGEVS
SRGIELEGKSSFNNIDLIASLSYLDVFYSKSNYGNQGNRSEAQAPWAASVWTDYHFTGNL
LQGVTLGGGARYTGKNYGDSDNTFKTPSFVIYDATLSYDLAALDPGFKGVSTSLNVQNLF
DREYVSSCNYSFGCYYGQQRTAALEVKYDW
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgccccgttgagaccctgcctgctggcgctgaccattaccctgagcattgcc
tgccctttgggtgcggtggccgggccgctggccaatgaacagagcgccctgcgtgccttt
gacctgccggcggcgccgctgggtgtgacactgagccggattgcccgtgacagccagctg
accctgtcggtagctcctgccttgttgcaggggaaaacctcggccccggtacggggcatg
ttcaccccgcagcaggccgccgagcgtgccctggcaggcagcggtctgggtttgaacgtg
acccagagcggtgccctgagcgtttacccgctggcggcaacgggcaccttgaatctggga
gcaaccacagtatcggggcgtaccgccgaggacgctcgcggagcggttgacggttttgtt
gccacccgatcggccacggccactaaaaccgatacaccgattctggagatcccgcagacc
atcaacgtggtgacggcggatcaggtgcaggtccagggcgcccgcgatctgacccaggcc
ctgcgttacaccccgggcctgagcaccaatggctacaccgaccgcaacaccatcgccgat
gaaatcaccagccgcggctttgccccgaccctgctttatctcgatggcgcttatttgccc
tcggccgggagtctgggcggcgcgccacagatcgacccctataccctggagcgcatcgaa
gttcttaaagggccgtcctcggtgctctacgggcagaatcagcccggaggcatgatcaat
atggtgtccaagcggccgagtaccgaagccgcgcaccagatcaaggtcggcaccggcagt
ttcgatcgctacaacctggcgtttgacttcacggggccactggacgaggccaaaaccctc
agttaccggttgatcggggtcggcaataccggcagcgaacaggtggaccacaccgaggat
tcacgccagctgctggcgcccagcttcagctggatgcctgacgacgacaccgagctgacg
ctgtatgcgcaaatccagcgcgatgacgccctggccgactatcaggccttgccggcggtg
ggcagcctgtatcgcaactcccagggcaacaggattgatcgtgatacgtttctgggcgac
tcgaaatggaacgactacaagcgtgatcaatacgtgcttggctatcagttttcccacgct
ttcaatgaggccatgacctatcgccagagcctgagctatatcgacgtcaacgaccgctac
aaaggcttttacctcaaccgttttgtcaccacccccgagggcatcagtgacacccacgcc
agtcgcaccaagctcgactggcgccagcaaaacagttcctacagtttcgacaaccacctg
caaagcgacttcaccaccggccccctgcagcacaccctgctggtgggcctggactaccgg
gattttacccgcaagtatcagggctacaacctgtcgggcagtgaaatcatcgacctctac
aaccccaccaactaccgcaccacgggggtgccgaccctgaccaccaagtgggataacagc
gtcaagcaaaccggcttctatgtgcaggatcagatcaagttcgacaacttcatcctgacc
attggcgggcgccatgactgggccaaagtcgataacaatgacctgctggccgattcccgg
gagatgcaaaacgacaacaagtttaccgggcgcgtggggctgacctacgtcacctcgttc
gggctggcaccctatatcagctacaccgaatcgttcctgccgtcagtggggaccgcagct
ccggagcgtgggggcaaggcgttcatcccgcaattgggcaagcagtatgaagtgggggtc
aagtatcagcctgacgacagcaccttgctcacggcgtcggtgtttcagatcaagcagcag
aacgtgctgaccggtgacttgcagtaccaggagtatcagattcaggaaggtgaagtcagc
tcgcgggggatcgaactggaaggcaaaagcagcttcaacaatattgacctgattgcctcg
ttgtcctacctggatgtgttctacagcaagtccaactatggcaaccagggcaaccgcagc
gaagcccaggcaccatgggcggcgagtgtgtggaccgattaccacttcaccggcaacctg
ctgcagggggtgaccctgggcggcggtgcgcgttacaccgggaagaattacggtgactcg
gacaacaccttcaaaaccccgtcattcgtgatctacgacgccaccctcagctatgacctg
gcggcgctggacccggggttcaaaggggtgagtaccagcctcaatgtgcaaaacctgttc
gaccgcgagtacgtctcgtcgtgtaattacagctttggctgttactacggccagcaacgg
actgcggcgctggaagtcaaatacgactggtga
DBGET
integrated database retrieval system
