Pseudomonas fragi: AV641_13945
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Entry
AV641_13945 CDS
T04285
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_13945
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_13945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
VanW
Motif
Other DBs
NCBI-ProteinID:
AMB80092
LinkDB
All DBs
Position
3126361..3128532
Genome browser
AA seq
723 aa
AA seq
DB search
MHAKNLFAYHPLALALCLSGLPLSTAFAAEQPATAAPGGALMLEETSINAKAVENPTGHV
SGPVAMRSTSASKTDAAIKEIPQSVSIITRDEMDQRKADTLAEVLSFTPGVITQPGGFSR
VGDDFVIRGFNVGSGTGGILRDGMKLQGSVYDGGIEPYGLERVEVVKGASSVLYGQLSPG
GLINTITKRPTDVPLHEVNVEYGSHARKQYSFDLGGPLDDQGQFSYRLTGLWRDSDTQTV
DAPDDRRYIAPAFTWRPDEDTSLTFLASYQETRTSFAPPLDYDLTTSSSTLYPKVDRDLF
TGERGFDHYNNYSTTIGYLFEHSFTPDLKILHSLRHFDANLSWDYMQIADTGSAALRNQG
LLARRASIRREHSEGWTSDNNVQWTLNSGRWQHTLLAGVDYYHKTYDSHRYAGATSLFNP
DAPVYDAPTTITSADSGSDLHSSQTGLYLQDQIKFDDKWILVLGGRQDWAESRTYANATG
KRTPREDKKATGRVGLVYEADNGLAPYISWSQSFLPANVFNANADTSFEPTEGEQYEMGV
RYTPPGMNALLTAAVYDLKQKNSLSTDLTGNTVQFGETRSRGVELEAKAEITANLSTTAS
YTYTDAKITEDSVASRVGTRIDGVPYHMASLWADYRLSALGLPKVVLGGGARYMGTSRTS
SSDLDEKVDAYTLFDAKVSYEVDDNWTVAMKAQNLSNEKYLFCNVSCRYGDERTLIGSVN
YRW
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcaaaaaacctcttcgcctaccatcccttggcgctggccctgtgtctcagtggc
ctgccactgagcaccgccttcgccgccgagcaacccgctaccgcagcgcccgggggcgcg
ctgatgctggaagaaaccagcatcaatgccaaagccgtcgagaaccccaccggccatgtc
agcggcccggtggcgatgcgcagcaccagcgccagcaaaaccgacgcggcgatcaaggaa
atcccgcagtcggtgtcgatcatcacccgcgatgaaatggaccaacgcaaggccgatacc
ctggccgaagtcctgagcttcaccccgggggtgattacccagccggggggtttcagccgc
gtgggcgatgacttcgtgatccgtggcttcaacgtgggctcgggcaccggcggtattctg
cgcgacggcatgaaactgcaaggcagcgtgtatgacggcggcatcgaaccctacggcctg
gagcgcgtggaagtggtcaagggcgcgtcttcagtgctgtacggccaactgtcgccgggc
ggcctgatcaacaccatcaccaagcgcccgaccgatgtcccgctgcatgaagtcaacgtc
gaatacggcagccatgcgcgcaagcagtacagcttcgacctgggcggcccgctggatgac
caggggcagttttcctaccgcctcacgggcctgtggcgcgacagtgacacccagaccgtc
gacgctcccgatgaccgtcgctacatcgcgccggccttcacctggcgtccggacgaggac
acctcgctgaccttcctcgccagctaccaggaaacccgcaccagcttcgcgccgccgctg
gactacgacctgacgacgtcatccagcaccctttaccccaaggtcgaccgcgatttgttc
accggcgagcgcggcttcgatcactacaacaactactcgaccaccatcggctacctgttc
gaacacagcttcacccctgacctgaaaatcctgcattcgctgcgccacttcgatgcaaac
ctgagctgggactacatgcaaattgccgataccggcagcgccgccttgcgcaatcaggga
ctgctggcccgcagggcgagcatccgccgtgagcactccgaaggctggaccagcgacaat
aacgtgcaatggaccctcaacagcggccgctggcagcacactctgctggccggggtggat
tactaccacaagacctacgactcgcatcgctacgctggcgccacttcgctattcaacccg
gacgcaccggtgtacgacgcaccgaccaccattacctcggccgatagcggatcggatctg
cacagttcgcagaccggtctttacctccaggatcagatcaagttcgacgacaagtggatt
ctggtcctgggcggtcgccaggactgggccgagagccgaacctatgccaatgccaccggc
aagcgcacgccacgggaagacaagaaagccactggccgcgtaggcctggtgtatgaagca
gacaatggcctggcgccgtacatcagctggagccagtcgttcttgccggccaacgtgttc
aacgccaacgccgacacctcgttcgagccaaccgaaggcgaacagtacgaaatgggtgtg
cgctacaccccgccaggcatgaatgcgctgttgaccgccgcggtgtacgacctcaagcag
aaaaactccctgagcaccgacctcaccggcaacaccgtgcagttcggtgagacccgctcc
cggggtgtcgagctggaggcaaaagccgagatcaccgccaacctcagcaccaccgcctcc
tatacctacaccgatgccaagattaccgaagactccgtggccagccgggtcggtacccgc
atcgacggcgtgccttaccacatggccagcctgtgggccgactatcgcctgagcgccctg
ggtctgcccaaggtcgtgctcggcggtggcgcccgctacatgggtaccagccgcacctcc
agctcggacctggacgagaaggttgacgcctacaccctgttcgacgcgaaagtcagctac
gaagtcgacgacaactggaccgtggccatgaaggcgcaaaacctgtccaatgagaagtac
ctgttctgcaacgtttcttgccgttatggcgacgagcgcacgttgatcggctcggtcaac
tatcgctggtaa
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