Pseudomonas fragi: AV641_14830
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Entry
AV641_14830 CDS
T04285
Name
(GenBank) nickel ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pfz
Pseudomonas fragi
Pathway
pfz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV641_14830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_14830
Transporters [BR:
pfz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AV641_14830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMB80253
LinkDB
All DBs
Position
complement(3337572..3339152)
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AA seq
526 aa
AA seq
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MSKPAWMRNTLVAAALLSVLAAPVYSAQARTLQLAIGDEPTEGFDPMLGWSHGSYLLLHS
PLLKQNEDLSWSSFLLTDYQTSDDGKTWTLKLKPDLKFSDGSALTARDVAYTYNNAAASG
GKVDMGNFLKAEAVDPLTVRIELKAPQSTFVNVLGSLGIVSADKYDAKTYAQKPVGAGPY
RLVSYQPGQQLIVEANPYYAGQKNDFDKLVFVFLDEDSSFAAAQSKQLGIVRIAPSLAVT
PTPGMKLWVRPSVENRGIVLPTTRAGEKDAHGYPVGNDVTADVAIRKAINYAINRQLLAD
QILEGHAIPAYTGVQGLPWDNPQAAFKDGDIARAKQILDEAGWVETASGIRAKEGVPAKL
TLWYASGDATRRDLAQAVRSMLKPVGIEVDLKSGSWETVERNMHANPTLFGWGSLDPMEL
YHHYSSKAAGVEYYNPGYYKNPVVDQHLQQALDAPTWQQAVPFWQQVEWDGKTGAGVKGD
AAWAWLLNVQHTYLADECIDLGKGAPEIHGSWSLLNSLDGWKWTCK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcctgcatggatgcgcaataccctggtggccgctgccttgttgagtgtgctc
gctgcgccggtttactcggcgcaggcacgaactctgcaactggccattggcgatgaaccc
actgaaggctttgaccccatgctgggctggagtcatggcagttatctgctgttgcacagc
ccgttgctcaagcaaaacgaggacttgtcctggagcagtttcctgctcactgattatcag
accagtgacgatggcaaaacctggactttgaagctcaagcccgacttgaaattctccgat
ggctcggccctgactgccagggatgtggcctacacctacaacaatgcggcggccagtggc
ggcaaggtcgatatgggcaacttcctcaaggccgaagcggttgatccgctcaccgtgcgc
attgagttgaaggcgccgcaaagtaccttcgtcaatgtgctggggtctctgggcattgtc
tcggccgacaagtacgacgctaaaacctatgcccaaaagccagttggtgccgggccttac
cggttggtcagctatcagccggggcagcagttgattgttgaagccaatccgtattacgcg
gggcagaaaaacgatttcgacaagctggtgtttgtattcctcgatgaggacagctcgttt
gccgcggcccagagcaagcagctgggtatcgtacgaatcgctccgtcgctggcggtgacg
ccgacaccgggcatgaagctgtgggtacgccccagtgtcgagaatcgcggcattgtgctg
cccaccaccagggcaggcgaaaaggatgcccatggctaccccgttggtaacgatgtgacc
gccgatgtggcgatccgcaaggccatcaactacgcaatcaatcgccaattgctggcggac
cagattctcgaagggcatgcgatacctgcctacaccggggtccagggtttgccctgggat
aacccgcaggcggccttcaaggatggcgatatcgccagggccaaacagatcctggatgaa
gccggctgggttgaaaccgccagtggcattcgtgccaaagagggtgtgccggccaaactc
accctgtggtacgccagtggcgatgcgacccgacgtgacttggcccaggccgtgcgctcc
atgctcaagccggtcgggatcgaggtggacttgaagtcaggcagttgggaaaccgttgaa
cgcaacatgcacgccaacccgaccctgtttggctggggcagcctcgacccgatggagctt
tatcatcactacagcagcaaggcggccggggttgagtactacaaccccggttattacaag
aatcctgtagtcgatcagcatttgcagcaggcgctggatgctccgacctggcagcaggcg
gtaccgttctggcagcaagtggagtgggacggcaagaccggcgccggggtcaagggcgat
gcagcctgggcgtggttgctgaacgtacagcacacgtatttggctgatgagtgtatcgac
ctgggcaaaggcgctccggaaatccacggttcctggtcgctgctcaatagccttgatggc
tggaagtggacctgcaagtga
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