Pseudomonas fragi: AV641_15115
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Entry
AV641_15115 CDS
T04285
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfz03000
]
AV641_15115
Transcription factors [BR:
pfz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AV641_15115
BRITE hierarchy
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GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
GTP_CH_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AMB80304
LinkDB
All DBs
Position
3388196..3388801
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AA seq
201 aa
AA seq
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MSSIRERNKELILRAASEEFADKGFAASKTSDIAAKAGLPKPNVYYYFKSKENLYREVLE
SIIDPILRASTPFNADGEPNAVLSNYIRSKIMISRDLPFASKVFASEIMHGAPHLSEQQV
QLLNVQAKHNIDCIQTWIDRGQIAPIDPHHLMFSIWAATQTYADFDWQISAITGKAKLQD
SDYEAAAQTIIRLVLKGCAPD
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatccgcgagcgtaataaagaactgattttgcgtgccgccagcgaagagttc
gctgacaagggtttcgccgccagcaaaaccagcgacatcgccgccaaggcaggcttgccc
aagcccaatgtctactactacttcaaatccaaggagaacctctaccgcgaggtcctcgaa
agcattatcgaccctattctgcgcgcatcgaccccgttcaatgccgacggcgaacccaat
gccgtactgagcaattacatacgttccaaaatcatgatttcccgcgacctgccctttgct
tcaaaagtgttcgccagcgaaatcatgcatggcgccccgcacctgagcgagcagcaggtg
caattgttgaacgtccaggccaaacacaacattgactgcatccagacctggatcgaccgt
ggccagattgcgccgatcgacccccatcacctgatgttcagtatctgggcagcgacccag
acctatgccgacttcgactggcagatctcggccatcaccggcaaagccaaactgcaagac
agcgactacgaagccgcggcccagaccatcatccgcctggtgctcaagggctgtgcaccg
gactga
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