Pseudomonas fragi: AV641_15280
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Entry
AV641_15280 CDS
T04285
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pfz
Pseudomonas fragi
Pathway
pfz02020
Two-component system
pfz02025
Biofilm formation - Pseudomonas aeruginosa
pfz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AV641_15280 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AV641_15280 (fliA)
09142 Cell motility
02040 Flagellar assembly
AV641_15280 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfz03021
]
AV641_15280 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pfz02035
]
AV641_15280 (fliA)
Transcription machinery [BR:
pfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AV641_15280 (fliA)
Bacterial motility proteins [BR:
pfz02035
]
Flagellar system
Flagellar assembly proteins
Stator
AV641_15280 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
MarR_2
GerE
HTH_AsnC-type
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AMB80334
LinkDB
All DBs
Position
complement(3421423..3422163)
Genome browser
AA seq
246 aa
AA seq
DB search
MTASGYRMYSKASRDSQYELIERYAPLVKRIAYHLLARLPASVQVDDLIQAGMIGLLEVS
TKYDATKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRVIEAKTGCDAK
DHEVAAELQLSLDDYYAILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHPEPSRDLEDE
RFQTALADAISLLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRARL
GQWRAN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccagcggctatcgcatgtacagcaaagcgtcgcgtgacagccagtatgagctg
atcgaacgctacgcaccgttggtcaagcgtatcgcctatcacctgttggcgcgtttgccc
gccagcgtgcaggtggacgacctgatccaggccgggatgatcggcctgctcgaagtgtcg
accaaatacgacgcgaccaagggcgcgagtttcgagacctacgccggtatccgcattcgt
ggtgcgatgctcgatgaagtgcgcaagggcgactgggcgccgcgctcggtgcaccgcaat
acccgcatggtcagtgacgcaattcgggtaattgaagcaaaaaccggttgtgacgctaaa
gatcacgaggttgcggccgaactccagttaagccttgatgattattacgccattttgaat
gacaccctgggcagccgcctgttcagtttcgacgacctgttgcaggacggcgagcacgaa
gggttgcatgaggatggtgccagtgctcacccggaaccctcgcgggacctggaagatgaa
cgcttccagacagcactggccgacgcgatcagcctgttgccggagcgtgagcgactggtc
ctggcgctgtattacgacgaagaactgaacctcaaggaaatcggcgaggtgctgggggtc
agcgaatcccgtgtcagccagctgcacagccagtgcgccgcccgactgcgggcacgcctg
gggcagtggcgggcgaactga
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integrated database retrieval system
