Pseudomonas fragi: AV641_16130
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Entry
AV641_16130 CDS
T04285
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_16130
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_16130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Beta-sol_PIC_HAP1_IgA0_2nd
Motif
Other DBs
NCBI-ProteinID:
AMB80487
LinkDB
All DBs
Position
complement(3598577..3602251)
Genome browser
AA seq
1224 aa
AA seq
DB search
MIRGLKIVGLVLLALVLLVVVGLGVVLGTQAGSRWVLGQVPGLQVENFAGRLGGQWSADY
LLWEQGSSRVEVNRPIFAWSPGCLTRMTLCIDQLQADRVSLQFPPGDDSSSGPVSLPDLK
LPLAIEVGDVKVGNVLFNGIEQLKGMQMAAQWTAKGLRIDSVHVEREDLNVEMSGLLQPN
GDWPLALQGNISLPAPDGKLLALALKVDGNVRTTLNLTADTSGYLNAHIAGELQPLADNL
PAQLKITSEQFNPGFDLPDTLQVEQLVLSAKGDLKDGYELNGSATLPAENTPVNLLLKGR
VDARGAQIAALQLTSGPQQHLKLSGQVDWHQGLSAEAKIDWLEFPWHNLYPVIAKPDVDL
RTFSGEVSYRDGNYLGNFKADLDGPAGKFSLSSPFSGDLGKIFLPELKLVAGQGKAEGHV
NVQFADGVAWDTALDLSAINPAYWVAELPGTLAGPLRSAGEFKNERLKLDANLDLKGRLR
GLPAMLQAKAAGEGEAWTVSALDIRLGDNRINGTASLQQQIKAQLDLNLPRLGQLWPELR
GQLKGQVDVAGTLKAPQGKVVLNGQQLAFADNHLQNLTLNASLDGNQRGRIDLKGSGIQA
GDTQFGLLTANGSGDIKRQQLKLALQGPTLQLGMALDGGLDKDNWRGRLVSGDIKAGGQD
WQLQKPARLERLADGRVNLGAQCWISGPASLCSEDQRLVPDPQLRLHLKQFPLDSLAQWL
PKDFQWQGQLNADLLLDLPASGPKGQVVVDASGGTLRIKDKGQWLNFPYQTFKLTSNLTP
DRVDTRFDFDGGKLGQLMLSARINPLPKNKPITGEFRLSGLDVSVVRPFVPMVEKLTGQL
NGSGTIAGGLLAPHINGNVALTGGEVSGPQLPTNFENLQLTANINGETAQLNGGWTSGKQ
GQGSISGDVAWGKATAVNVLVKGNHLPVTVEPYAKLEVAPDLKISLNANNTLMIAGTVNV
PKGEIVVRELPPSTVKISDDTVIVGQQVSDEAPPMVVDMDINVVVGQELLTFSGFGLNAD
LAGQVHIGNNMDTRGELRLNNGRYRAYGQRLTIRRARLLFAGPIDQPYLDIEAVRQTDDV
IAGIRLTGSAEQPTTQIFSEPAMSQEQALSYLVLGRPLTGTGEDDNLLAQAALGLGLMGS
SGITTDLANHLGIKDFELDTEGSGNDTAVVASGKINERLSVRYGVGVFEPASTIALRYKL
SKRVYVEVASGVASSLDIFYKRDF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgtggtttgaaaatagttggccttgtgctgttggcgttggtgctgctggtggtt
gtcgggctgggggtggttcttggcacccaggcgggcagccgctgggtgttggggcaagtg
cccggtttgcaggtggaaaactttgccgggcgcctgggcggccagtggagtgccgattac
ttattgtgggagcaaggcagcagccgtgtcgaagtcaatcggccgatttttgcctggtcg
ccgggctgcctgacccgcatgacgctgtgtatcgaccagttgcaggccgaccgggtcagc
ctgcaatttccgccgggtgacgacagcagcagcggcccggtcagcttgcctgatctcaaa
ttgccgctggcgatcgaagtcggggacgtgaaagtcggcaatgtactgttcaacggtatc
gagcagctcaagggcatgcagatggcggcgcaatggaccgccaagggactgcggatcgac
tcggtgcatgtcgaacgtgaagacctgaatgtagagatgtccgggctgttgcagcccaat
ggcgactggccgcttgccctgcaaggcaacatcagcctgcctgcgccggatggcaaacta
ttggcactggcgctgaaggtcgatggcaatgtgcgcaccacgctgaacctgacagcggat
accagcggttatctcaatgctcatatcgcgggcgagcttcaacccttggccgacaacctg
ccggcgcagttgaagatcacatcggagcagttcaaccccggcttcgacctgccggacacc
ttgcaagtcgaacagctggtgctcagcgccaaaggtgatttgaaggacggttacgagctg
aacggcagcgccaccttgccggctgaaaatacgccggtaaatctgctgctcaaagggcga
gtggatgccaggggcgcacagatcgcggcactgcaattgacctccggcccccagcaacac
ttgaagctctcggggcaggtggactggcatcagggattgagcgccgaggccaagatcgac
tggctggaattcccctggcataacctttacccggtcatcgccaaacctgatgtggatctt
cgtacctttagcggcgaagtctcctaccgcgacggcaattacctgggcaacttcaaggcc
gacctcgacgggcctgcaggcaagttcagcctcagcagcccgttcagtggcgatctgggc
aaaatcttcctgccggagctcaagctggttgccgggcagggcaaagccgagggccacgtg
aatgttcagtttgccgacggggttgcctgggacaccgcgctggacttgagcgccatcaac
cccgcttactgggttgccgaattgcctggcacgctggcggggcccttgcgtagcgccggc
gagttcaagaacgagcgcctcaagctggatgccaatcttgacctcaaaggccgtctgcgt
ggcttgcccgccatgcttcaggccaaagccgcgggtgaaggcgaggcctggaccgtcagt
gcgctggacattcgtctgggggataaccggattaacggcaccgccagtttgcagcaacag
atcaaggcacaactggacctcaatttgccgcgcctgggtcagctatggcctgaactgcgc
gggcaacttaaagggcaggtcgacgttgccggtacgctcaaggcgccgcaaggcaaggtt
gtgttgaatggccagcaattggcttttgctgacaaccacctgcaaaacctgaccctgaac
gccagcctcgatggcaatcagcgaggccggatcgacctcaaaggcagcggaattcaggcc
ggtgatactcagttcggtttactgaccgctaacggcagcggcgatatcaagcgtcaacag
ctgaaactggctttgcaagggccaactctgcagctgggtatggcactggacggtggcctg
gacaaagacaactggcgtggacgactggtcagtggtgacatcaaggctggcggccaggat
tggcagctgcaaaaaccggcgcgtctcgagcgtctggccgatggccgggtcaacctgggg
gcgcaatgctggatctccggtcctgccagcctgtgcagtgaagatcagcgtctggtgccg
gacccgcaactgcggttgcacctcaagcagttccccctcgacagtctggcgcagtggttg
cccaaggatttccagtggcagggtcagctcaacgcagacctgttgctggacttgcccgcc
agcgggccgaagggccaggttgtggtggatgccagcggtggcactttgcgtatcaaagat
aagggccagtggctgaacttcccgtatcagacgttcaaattgaccagcaacctgacccct
gaccgggtcgacacgcggttcgattttgacggtggcaagctggggcaattgatgctcagc
gcacggatcaatccattgccgaaaaacaagccgattaccggtgagttccgcctgagcggg
ctggatgtttcggtcgttcgtccctttgtacccatggttgaaaagctcacggggcagttg
aatggctcgggcacgatcgcgggcggtttgctggcgccgcacatcaacggcaatgtggcc
ctgaccggtggtgaggtgtcgggcccgcaactgccgaccaacttcgagaacctgcaactg
acggccaatatcaacggcgaaaccgcgcagctcaatggtggctggaccagcggcaagcag
gggcagggcagcatcagcggcgatgtggcctggggcaaggccacggcggtcaatgtattg
gtcaagggcaatcatcttccggtcacggttgagccatacgccaagctagaggttgcgccg
gacctgaaaatttcgcttaacgccaataacaccctgatgattgcgggcacggtaaacgta
cccaaaggtgaaatcgtggttcgcgaattgccgccttcgacggtcaagatttcggatgac
actgtgattgtcgggcaacaggtgtcggatgaggcgccccccatggtggtcgacatggac
atcaacgtggtggttgggcaagagctgctgacgttttcgggctttggcctgaatgccgat
ctggcgggccaggtgcatattggcaacaacatggacacccggggtgagttgcgtctgaac
aatggtcgctaccgtgcttatggccagaggctgaccattcgccgggcgcgtctgctgttt
gcaggccctatcgatcagccgtatctggacattgaagcggttcgccagaccgacgacgtc
atcgccgggattcgcttgacgggcagcgcggagcagcccaccacgcaaatcttctcggag
ccggccatgagtcaggagcaggccttgtcgtacctggttctggggcgtccgctgacaggc
actggcgaagatgacaacttgctcgctcaggcagctttgggcttagggctgatgggcagt
tcgggaattaccacggatctggccaatcatttggggatcaaggattttgagctcgatacc
gaaggcagtggcaatgacaccgcagtggtggccagtggcaagatcaacgaacgattgagc
gtgcgctacggggttggtgtatttgaacccgccagcaccattgccttgcgctacaagctc
agcaaacgggtgtatgtggaggttgccagcggcgtcgccagttcgctggatatcttctac
aaacgggatttctga
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integrated database retrieval system
