Pseudomonas fragi: AV641_16170
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Entry
AV641_16170 CDS
T04285
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00280
Valine, leucine and isoleucine degradation
pfz00650
Butanoate metabolism
pfz00907
Pinene, camphor and geraniol degradation
pfz01100
Metabolic pathways
pfz01120
Microbial metabolism in diverse environments
pfz04146
Peroxisome
Module
pfz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AV641_16170
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AV641_16170
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AV641_16170
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AV641_16170
Enzymes [BR:
pfz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
AV641_16170
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Motif
Pfam:
HMGL-like
HypF_C_2
Motif
Other DBs
NCBI-ProteinID:
AMB80495
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Position
3609968..3610867
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AA seq
299 aa
AA seq
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MTLPTHVRLIEVGPRDGLQNEARPISVADKVQLVDALTDAGLGYIEAGSFVSPKWVPQMA
GSAEVFAHIRRKPGVVYGALAPNMRGFEDAMAAGVKEVAVFAAASEAFSQRNINCSVSES
LARFVPIIEAARQHGISVRGYVSCVLGCPYEGDIAPQQVAAVAQELYAMGCYEVSLGDTI
GTGTPTATRTMIEAVSAHVPREKLAGHFHDTYGQALVNIYASLQEGIAVFDSSIAGLGGC
PYAKGASGNVATEDVLYMLNGMGIETGVDLDKLLLAGEHICKVLDRVTGSRVARARQGA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacactccctacccatgtgcgtctgattgaagtcggcccgcgcgacggcctgcaaaat
gaagcccgccccataagcgtggcggacaaggtgcaactggttgacgccctgacggatgcc
gggcttggctatatagaggccggtagttttgtctcgcccaagtgggtgccgcaaatggcc
gggtctgccgaagtctttgcccatatccggcgcaagcccggtgtggtctatggcgctctg
gcgcccaacatgcgcgggtttgaagacgccatggcagcgggtgtgaaggaggttgcggta
tttgccgctgcgtccgaggcgttctcccaacgcaatatcaactgttcggtcagcgaaagc
ctggcccgctttgtccccatcatcgaggccgcccggcaacatggcatcagtgtgcgcggc
tacgtgtcctgcgtgctcggctgcccctatgaaggcgacatcgcaccgcaacaggtcgca
gcggtggcacaagagctgtatgccatgggctgttacgaggtttcactgggtgacaccatc
ggtaccggcactccgacggcgacacggacaatgattgaggcggtaagcgctcatgtcccg
cgggaaaaactcgccgggcatttccatgacacctatggccaggcgctggtcaatatctac
gccagcctgcaagagggcatcgcggtgtttgacagctcgatcgccgggctgggcggctgc
ccgtatgccaagggcgccagcggcaacgtggccaccgaagacgtgttgtacatgctcaac
ggcatgggcatcgagaccggggtcgacctggacaaactgctgctggccggcgaacacatt
tgcaaggtactggaccgtgttaccggctcccgggtagcaagggcgcgccaaggggcataa
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