Pseudomonas fragi: AV641_16275
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Entry
AV641_16275 CDS
T04285
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz03030
DNA replication
pfz03430
Mismatch repair
pfz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV641_16275
03430 Mismatch repair
AV641_16275
03440 Homologous recombination
AV641_16275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfz03032
]
AV641_16275
03400 DNA repair and recombination proteins [BR:
pfz03400
]
AV641_16275
Enzymes [BR:
pfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV641_16275
DNA replication proteins [BR:
pfz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AV641_16275
DNA repair and recombination proteins [BR:
pfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AV641_16275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AMB80514
LinkDB
All DBs
Position
complement(3635680..3636438)
Genome browser
AA seq
252 aa
AA seq
DB search
MRSVVLDTETTGMPVTDGHRVIEIGCVELMGRRLTGRHFHVYLQPDRESDEGAIGVHGIT
NEFLVGKPRFAEVADEFFDFIKGAQLIIHNAAFDVGFLNNEFALIGQTDRADITRHCTIL
DTLAMARARHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLSLA
GNASDGNGSGEGSGNQASEIIRLSADRQPGRIIRASESDLAEHAARLEAIAKSAGGPSLW
AQLLEAKEQTLQ
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagtgttgttctcgatactgaaaccaccggtatgccggttaccgatggccaccgg
gtgatcgagatcggttgcgtcgagttgatgggccgccgtctgaccggccggcattttcac
gtgtatctgcaacccgatcgtgaaagtgacgagggcgcaattggcgttcacggtattact
aacgaatttctggtgggcaagccccgtttcgcagaagtcgccgacgagttttttgacttc
atcaaaggcgcgcaactgatcattcataacgccgcgttcgacgtgggctttctgaataac
gaatttgccctgatcgggcagaccgaccgcgccgacatcacccgccattgcactattctc
gacaccctggcgatggcgcgagcgcgtcatccgggtcagcgcaacagcctggatgccttg
tgcaaacgctatggcgtcgacaactcggggcgtgaactgcacggcgcactgctcgactcc
gagattctggcggacgtttacctgaccatgaccggtggccagaccagcctgtcgctggcc
ggtaacgcatctgacggcaatggttccggcgaaggttcaggcaaccaggccagcgaaatc
atccgcttgtcagccgatcgccagcctggccggattatccgtgcaagtgaaagcgacctg
gccgagcacgcggctcgtctggaggctattgccaagtctgcgggtgggccatcgctgtgg
gcccagcttctcgaagccaaagaacagacactgcaataa
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