Pseudomonas fragi: AV641_16340
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Entry
AV641_16340 CDS
T04285
Name
(GenBank) peptidylprolyl isomerase
KO
K03770
peptidyl-prolyl cis-trans isomerase D [EC:
5.2.1.8
]
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pfz03110
]
AV641_16340
Enzymes [BR:
pfz01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
AV641_16340
Chaperones and folding catalysts [BR:
pfz03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
AV641_16340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SurA_N_3
SurA_N_2
Rotamase
Rotamase_3
Rotamase_2
SurA_N
Motif
Other DBs
NCBI-ProteinID:
AMB80527
LinkDB
All DBs
Position
complement(3650262..3652133)
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AA seq
623 aa
AA seq
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MLQNIRDNSQGWIAKTIIGVIVALMALTGFDAIFQATSTSQDAAKVNGDEITQVELSQAV
DMQRRQLMQQLGKDFDASLLDEKMLREAALKGLIDRKLLLQGANQAKFSFSEAALDQVIL
QTPEFQDNGQFSAERFDQVIRQLGYGRLQFRDMLGQEMLIGQLRAGLAGSGFVTDEQVNA
FARLEKQTRDFSSLNIKADPAAVKVSDDEIKAYYDEHAKEFMTPDQVVIDYIELKKSSFF
DQVAVKDEELQALYQKETANLAEQRRAAHILIEVNDKVSDEQAKAKIADIEQRLAKGESF
EALAKEFSQDPGSAANGGDLGFAGPGVYDPVFETALYALKKDQVSEPVRTSFGYHLIKLM
GVEAPEVPSFASLKDKLTRDLKTQQVERRFVDATKQLEDSAFEASDLVQPAQELKLTVHT
SAPFGRQGGEGIAANRDVIQAAFSTEVMDEGANSTAIELDPETVVVLRVKEHLKPEQLPL
EAVAASIRGQLVKEHASAAAKTKAEEIIKGLRDGKLPLDKPVDGLSWKAHEAVARGQEGI
DPAVLQAVFRLAKPVSKDKPTFGSVTLADGTVVVLRLDGVNDAAKPTEEEKASYRRFLAS
RVGQQDFEAYRKQLQNEAKVERY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaaatatcagggacaattcacaaggctggattgccaagaccatcatcggtgtc
atcgtcgcgttaatggcgttgaccggtttcgatgctatttttcaagccacctcgaccagc
caggatgcggccaaggtcaacggtgacgaaatcactcaagttgagctcagccaggctgtc
gacatgcaacgtcgtcagctgatgcaacagctgggcaaagatttcgacgcttctttgctg
gacgagaaaatgctgcgtgaagcagcccttaaagggttgatcgatcgtaagttgctgctg
cagggtgctaatcaggcgaagttctccttctctgaagcggccctggatcaggtcattctg
cagacacctgagtttcaggataacggccagttcagcgctgaacgtttcgaccaggtgatt
cgtcagctgggttacggtcgcctgcagttccgcgacatgctgggccaggaaatgctgatt
ggtcagctgcgcgccggtttggcgggcagtggtttcgtgaccgatgagcaagtgaacgct
tttgcccgtctcgaaaaacagacccgtgatttctcttctctgaacatcaaggccgacccg
gctgcggtgaaagtcagcgacgacgaaatcaaggcttactacgacgagcacgccaaagaa
ttcatgacgcccgatcaggtcgtgatcgactacatcgagttgaagaagtcttcgttcttt
gatcaggtggctgtgaaggatgaagagctgcaagccctttatcagaaagaaaccgccaac
cttgctgagcagcgccgtgctgcacacatcctgattgaagtgaacgacaaggtcagcgac
gagcaggccaaagccaagattgctgatattgagcagcgtctggccaagggtgaaagcttc
gaggctttggccaaagagttctctcaggatccaggctcggctgccaatggcggtgatctg
ggtttcgcaggtccgggtgtttacgatcctgtgtttgaaacagcgctttacgctctgaaa
aaagatcaggtttctgagccggttcgcaccagctttggctaccacctgatcaagttgatg
ggcgtcgaggcacctgaagtgccgagctttgccagcctgaaagataagctgacccgtgac
ctgaaaacccaacaggttgagcgtcgctttgttgatgcaaccaagcagctggaagactcc
gcatttgaggcgtccgatctggttcaacctgctcaggaactgaagctgaccgtgcatacc
tctgcaccgttcggtcgtcagggcggggaggggattgctgccaaccgtgacgtgatccag
gcagcattcagcactgaagtgatggatgagggggcaaacagtactgccatcgaactcgat
cccgagacggtagtggtgttgcgcgtcaaggaacacctcaagcctgagcagttgcctctg
gaagccgttgccgcaagcattcgtgggcaattggttaaagagcacgccagtgcagcggct
aaaaccaaagctgaagaaatcatcaaaggtctacgcgatggcaagttgccgttggataag
ccggttgatggcctgtcgtggaaggctcacgaggcagttgcccgcggtcaggaaggtatt
gaccctgccgtgctgcaagctgtgttccgcctggccaagccagtatccaaggacaaaccg
acctttggtagcgtcaccctggccgatggcaccgttgttgtactgcgtctggatggcgtg
aacgatgctgcgaagccgactgaagaagagaaggcgtcgtaccgtcgcttcctcgcttcg
cgtgtgggccagcaagacttcgaagcctaccgcaagcagttgcaaaatgaggcgaaggtc
gagcgctactaa
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