Pseudomonas fragi: AV641_16725
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Entry
AV641_16725 CDS
T04285
Name
(GenBank) porin
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_16725
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_16725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
Opacity
OmpW
Phage_OMP
DUF748
Motif
Other DBs
NCBI-ProteinID:
AMB80590
LinkDB
All DBs
Position
complement(3731377..3732351)
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AA seq
324 aa
AA seq
DB search
MKLKNTLGIAIGSFVAATSFGALAQGQGAVEGELFYKKQYNDSVKSVEDGYNPGASIGYF
LTDDVSLNLTYDTTNHTRSTKGDHQKIKGDNFGLNAQYHFGTVGDALRPYVSGGVAHKSM
TGVEANGHSGRDKSTFLTAGAGVKWYITDNLFARAGVEADYKLDNGKWDYAPTVGLGVNF
GGNGGKVAPAPVPAPAPVAEPEPEAPIAEVVRVELDVKFDFDKSVVKSQYMPDINNVADF
MKQYPATNTTVAGYTDSIGPDAYNQKLSQRRADAVRAALVNQGVAANRVDAVGHGEANPV
ASNATEEGRALNRRVEATVQAEAK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaacaccttgggcattgccattggttcctttgtagccgcaacttcgttc
ggtgccctggcacaaggccaaggcgcggtcgagggtgaactgttctacaaaaaacagtac
aacgacagcgtcaagtccgtagaagacggttacaacccaggcgcatcgatcggttacttc
ctgaccgacgacgtttcgttgaacctgacctacgacacgactaaccacacccgttccacc
aagggtgaccatcagaaaatcaaaggcgacaactttggtctgaacgctcagtaccacttc
ggcaccgtaggtgacgctctgcgtccatacgtttccggcggtgttgctcacaagagcatg
accggcgttgaggccaatggccacagcggtcgcgacaagtcgactttcctgactgcaggc
gctggtgttaagtggtacatcactgacaacctgttcgcccgtgcaggcgttgaagctgac
tacaaactggacaacggcaagtgggactacgctcctaccgttggcctgggtgtgaacttc
ggcggcaacggcggtaaagttgctcctgctccagttccagcgccagcaccagttgctgag
ccagagccagaagctccgatcgctgaagtggttcgcgttgaacttgacgtgaaattcgac
ttcgacaagtcggttgttaaatcgcagtacatgcctgacatcaacaacgttgctgatttc
atgaagcagtaccctgcgaccaacactactgttgctggttacactgacagcatcggtcca
gacgcctacaaccaaaaactgtcgcaacgtcgtgctgacgctgttcgtgcagctctggtt
aaccaaggtgttgcagctaaccgtgtagacgctgttggtcacggtgaagctaacccagtt
gcaagcaacgcaactgaagaaggccgtgctctgaaccgtcgcgtagaagctaccgttcaa
gcagaagctaagtaa
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