Pseudomonas fragi: AV641_16960
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Entry
AV641_16960 CDS
T04285
Name
(GenBank) porin
KO
K22110
oligogalacturonate-specific porin family protein
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_16960
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_16960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdgM
Phage_OMP
Porin_4
DUF481
bPH_8
Motif
Other DBs
NCBI-ProteinID:
AMB80634
LinkDB
All DBs
Position
3783920..3784705
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AA seq
261 aa
AA seq
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MTYPLNEALNTSFFSPRNAHVCKPGRYNGLIAALCFTALEGALMLMPTASHALDLDYQHQ
YNEKDRDHTDKVMITQALDNGLAFSFQMVASPAVKENGQPGQPFEHMTKDSLKGKVKYSH
KLTKRLKFKPKFTYSQGKDKKSYKPAFKFPYELNNSFSVIPGYYYKVTTYKDDGKESKRD
NVWSLGGKYRTDRMSIGIARKEIYSNQIAFDGKKRNYSNKFVIDYKVTHRFIPYFEVADV
YVDKDTDERQARYRVGFKYKF
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacctatccattgaatgaagccctgaacacatcttttttttcgccgcggaatgcacac
gtgtgcaaacccggtcgctacaacggtctgatcgccgccctgtgcttcaccgcactggaa
ggcgcgctcatgctgatgcccactgcgtcccacgcactggatctggattaccagcatcag
tacaacgaaaaggatcgcgaccacaccgacaaggtgatgatcacccaggccctggacaat
ggcctggcgttctccttccagatggttgccagccccgcagtcaaggaaaacggtcagccc
ggccagccgtttgaacacatgaccaaggattccctgaaaggcaaggtcaagtattcacac
aaactcaccaagcgcctgaagttcaaacccaagttcacctactcccagggcaaggataaa
aagtcctataaaccggcgttcaagttcccctacgagttgaacaacagtttttccgtgatc
cccggttactactacaaggtcaccacctataaagatgacggcaaggaaagcaaaagggac
aacgtctggtcattgggcggcaagtaccgaaccgaccggatgtccatcggcatagcgcgc
aaagagatttacagcaaccagatagcgtttgacggcaagaagcgtaactacagcaacaag
ttcgtcatcgactacaaagtgacccaccggtttattccttactttgaagtggccgacgtg
tacgtcgacaaagacaccgacgagcgtcaggcccgctatcgcgtgggctttaaatacaaa
ttctga
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