Pseudomonas fragi: AV641_16975
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Entry
AV641_16975 CDS
T04285
Name
(GenBank) LysR family transcriptional regulator
KO
K13794
LysR family transcriptional regulator, regulatory protein for tcuABC
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfz03000
]
AV641_16975
Transcription factors [BR:
pfz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AV641_16975
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Cob_adeno_trans
Motif
Other DBs
NCBI-ProteinID:
AMB80637
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Position
3787609..3788544
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AA seq
311 aa
AA seq
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MELRQLRYFVKIVELGSLGRAALELEVGVSALSQQVSRLENELSTRLLNRTSTGVTPTSA
GVAFLHHAQLTLRQAENAVMAAHRGRMSGYVSVGLAPTTATVLALPLINAMRERYPDIQL
HLVEMLSGHLATQLNARQIDLAILFQLEGGKRWSITPLLDEKLFVIASPQLPNAPRGDGV
QIADLGGLPLVMPSSQHGLRSTLMTAFERSGITPNIVMEVDGLAILMNAVRAGHAATIQP
GAAAALKGESGLSLVQITDPHVGRRNLLATLADDELSPAALATRLVMVEVAKKLVLDQQW
PGATLVETVSG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttggagttgaggcaactgcgctatttcgtaaagattgttgaactgggcagtcttggacgt
gccgccctggagctggaggtcggggtttcggccctgagccagcaagtctccaggctcgaa
aacgagctgtcgacccgcctgctgaatcgcacctccaccggcgtcacccccaccagcgcc
ggtgttgcctttttacatcacgcccaactgaccttgcgtcaggcggaaaacgccgtgatg
gctgcccatcgcggccgtatgagcgggtacgtcagcgtcggcctggccccgaccacggct
accgtgctcgcgctgcccttgatcaatgcgatgcgtgagcgctatccggacattcagttg
catctggtggaaatgctgtcgggccatttggccacgcagctcaatgcccgacagatcgac
ctggccatcctgtttcagctcgaaggcgggaagcgctggagcatcacccccctgctggat
gaaaagctgtttgtcatcgcctcaccccaattgcccaatgctcctcgcggtgatggcgtg
cagatagccgatctggggggcttgccgctggtgatgccgagttcgcaacacgggctgcgt
tcaaccttgatgacggcctttgagcggtcggggatcacccccaatatcgtgatggaagtc
gatggtctggcaatcttgatgaacgccgtgcgggccgggcatgccgccacgattcaaccc
ggcgcggcagcggcgcttaaaggcgagtccgggctttcactggtgcaaatcactgatccc
catgtgggccggcgtaatcttctggcgaccctggccgatgacgaactgtccccggcggcg
ctggccacgcggctggtgatggtagaggtggcaaaaaaactggtgctcgatcagcagtgg
cccggcgcaaccctggttgaaaccgtcagcggctag
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