Pseudomonas fragi: AV641_17400
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Entry
AV641_17400 CDS
T04285
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00061
Fatty acid biosynthesis
pfz00071
Fatty acid degradation
pfz01100
Metabolic pathways
pfz01212
Fatty acid metabolism
pfz02024
Quorum sensing
pfz04146
Peroxisome
Module
pfz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AV641_17400
00071 Fatty acid degradation
AV641_17400
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AV641_17400
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV641_17400
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfz01004
]
AV641_17400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfz04147
]
AV641_17400
Enzymes [BR:
pfz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AV641_17400
Lipid biosynthesis proteins [BR:
pfz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AV641_17400
Exosome [BR:
pfz04147
]
Exosomal proteins
Exosomal proteins of breast milk
AV641_17400
Exosomal proteins of breast cancer cells
AV641_17400
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AMB80714
LinkDB
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Position
complement(3876432..3878120)
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AA seq
562 aa
AA seq
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MQPDFWNDKRPAGVPLDIDMTAFTSVVDVFERSCKKFADRPAFSNLGVTITYAELERHSA
AFAGYLQNHTDLKPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTSREMRHQFKS
AGIRALVYLNMFGKRVQEVLADTEIEYLIEARMGDMMPAAKGWITNLVVDKVKKLVPAYQ
LPQAIAFKSVLHRGAGQPIRPVPVTLDDTAVLQYTGGTTGLPKGAMLSHGNLVANMQQVR
ACLSQHDESGQPILRDGREVMVAPLPLYHIYAFTANCMGMMVTGNHNILITNPRDIKGFI
KELKNWRFTAFLGLNTLFVALMDHPDFKSLDFSGLKVTNSGGTALVKATAERWEKITGCR
IVEGYGLTETSPVASANPCGSLARLGTVGMPVPGTAMKVVSDDGSDLGLGERGELCVKGP
QVMKGYWQNPQATAEVLDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE
DIVMAHPKVVNCAVIGVPDERTGEAVKLFVVAREGGVSVEELKAYCKDNFTAYKVPKQIV
LRDSLPMTPVGKILRRELRDNA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgtcctgccggtgtaccgctggatatagatatg
acggccttcacatcggtcgttgatgtgtttgaacgctcgtgcaagaaattcgccgatcgt
ccggcgttcagcaacctgggtgtgaccatcacttatgccgaactggagcgccacagcgca
gcgtttgccggttatcttcaaaatcataccgacctcaagcccggcgaccgcatcgctgta
cagatgcccaacgtgctgcaatatccgatcgcggtatttggtgcgttgcgcgccggtctg
atcgtggtcaacaccaacccgctgtacacctctcgcgaaatgcgccatcagttcaaaagt
gccgggattcgggcgctggtgtacttgaacatgttcggcaagcgcgtgcaggaagtgctg
gcagataccgagatcgagtacctgatcgaagccagaatgggcgacatgatgccggctgcc
aaaggctggattaccaacctggtggtcgacaaggtcaaaaagctggtgccggcctaccag
ttgccccaggccattgcctttaaaagcgtattgcaccggggcgcaggccagccgattcgg
ccggtgccggtgacgctggatgacacggcagtcctgcaatacaccggtggcaccaccgga
ctgcccaagggcgcaatgctcagtcacggcaatctggtggccaacatgcagcaggtgcgt
gcttgtctgtcccagcatgacgagagtgggcaaccgattctcagggacggtcgggaggtc
atggtggcgccgttgccgctgtaccatatctatgcatttaccgctaattgcatgggcatg
atggtcacgggtaaccacaacatcctgatcaccaatccgcgtgatatcaaaggtttcatc
aaggagctgaagaactggcggttcaccgcttttctggggcttaacaccctgtttgtcgcg
ctgatggaccatccggacttcaagagcctggacttctcggggctgaaggtcaccaactcg
ggcggtactgcgctggtcaaggccacggccgagcgttgggaaaaaatcaccggatgccgc
atcgttgagggctacggcctgactgaaacgtcgccggtggccagtgccaacccctgtggt
tctctggcccggctgggcaccgtgggcatgccggttccgggcacggcgatgaaagtagtc
agcgatgatggcagcgacctgggtttgggggagcgcggcgagctatgcgtcaaaggcccg
caagtcatgaaggggtactggcaaaacccgcaggcaacggccgaagtgctggacgccgag
gggtggttcaagacgggtgatattgcggtgattgatcccgatggttttgtccggattgtc
gatcgcaaaaaggacctgatcatcgtttcgggtttcaacgtgtaccccaatgaaatcgaa
gatatcgtgatggcccaccccaaagtggtgaattgcgcggtaatcggcgtgcctgacgag
cgcaccggggaggccgtcaaactctttgtagtcgcgcgcgaaggcggggtcagcgttgaa
gagctcaaggcgtactgcaaggacaacttcaccgcttacaaggtacccaagcagatagtg
ctgcgtgactccttgcccatgactcccgtggggaaaatcctgcgtcgcgagttgcgtgat
aacgcctga
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