Pseudomonas fragi: AV641_17445
Help
Entry
AV641_17445 CDS
T04285
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfz03000
]
AV641_17445
Transcription factors [BR:
pfz03000
]
Prokaryotic type
Helix-turn-helix
Other families
AV641_17445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_31
CHRD
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AMB80721
LinkDB
All DBs
Position
3885310..3886179
Genome browser
AA seq
289 aa
AA seq
DB search
MDRVRNLLEQIKSRLEDLNKAERKVAEIILQNPQQATRFSIAALAQAASVSEPTVNRFCR
SFGVSGYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQKIFGSAIASLDSACQALDPN
LISRAVDLLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTG
ELFVIISYTGRTRELVEVARIARANGASVLGLTAENSPLAKASTLSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASRYPVGDEFN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgcgaaatttactcgaacagatcaaaagccgcctcgaagacctgaacaag
gccgagcgcaaagtggcagaaatcatcctgcagaatccgcaacaggcgacccggttcagc
attgcggcgctcgcccaggcggcttccgtcagtgaacctacggttaaccggttttgccgt
tcgttcggggttagcggttacccggagctaaagctgcaactggcgcaaagtctggccagc
ggcgccgcctatgtcagccgcgcagttgaggccgacgacaatcccgaagcttacacccag
aagattttcggcagtgcaattgcatcgctcgacagcgcctgccaggcactggaccccaac
cttatcagccgcgccgtcgacttgctgatccaggcccgccagattcacttctttggcctg
ggtgcctcggcgccggtggcgctggatgcacagcacaagttctttcgtttcaacctggcc
gtcactgcccatgccgacgtgctgatgcagcgcatgattgcgtcagtggcgcacaccggc
gagctgttcgtgattatttcctacaccggacggacgcgggagctggtagaggtggcacgc
attgcgcgggcaaacggggcctcggtactgggactgaccgcagagaattcgccactggcc
aaggccagtaccttgagcctgaatattccgctgcctgaagacaccgacatttacatgccg
atgacctcgcgcatcatccagctcaccgtactggacgtattggccaccggcatgaccctg
cgccgcggcgtggatttccagccacacctgcgaaaaatcaaggaaagcctgaacgccagc
cgctatccggtgggtgacgagttcaactga
DBGET
integrated database retrieval system
