Pseudomonas fragi: AV641_17675
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Entry
AV641_17675 CDS
T04285
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AV641_17675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfz03400
]
AV641_17675
Enzymes [BR:
pfz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AV641_17675
DNA repair and recombination proteins [BR:
pfz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AV641_17675
Prokaryotic type
AV641_17675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMB80765
LinkDB
All DBs
Position
complement(3937193..3937885)
Genome browser
AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPVWKQALREEFEKPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNLTPLD
KIKVVILGQDPYHGPGQAHGLCFSVQPGIPVPPSLANIYKELKRDLNIDIATHGCLQHWA
EQGVLLLNTTMTVERANAASHAKKGWEHFTDRIIQVVSEQQPKLVFLLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFIGNGHFSRTNKFLEQNGLSPIDWKLPPA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggatgatcgtataaaacttgaaccggtctggaagcaggctttgcgcgaggag
ttcgaaaaaccttatatggcccagctgcgcgagttcctgcgccaggagcatgccgccggg
aaggaaatctatccgccgggcccgcttattttcaatgccctcaacctgaccccgctggac
aagatcaaagtggtgattctggggcaggatccctatcacggtcccggtcaggcccatggc
ctgtgtttttcggtccagcccggcattcccgtgccgccttcgctggccaatatttataaa
gaactcaagcgcgatctgaatatcgatatcgccacccatggctgcttgcagcattgggca
gagcagggggtgttgctgctcaacaccaccatgacagtggagcgcgccaatgccgcgtcc
cacgccaaaaaaggctgggagcacttcaccgaccggattatccaggtggtgagtgagcaa
cagcccaaactggtgtttttgttgtggggcgcccatgcgcaaagcaaacagaaactgatc
gatgccaccaagcatctggtgctgacctcggtacatccttcgccgctttccgcctatcgg
gggtttatcggcaacggtcacttcagtcgaaccaacaagtttcttgagcaaaacgggttg
tccccgatcgactggaaactgccgccggcctga
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