Pseudomonas fragi: AV641_17690
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Entry
AV641_17690 CDS
T04285
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfz03009
]
AV641_17690
Enzymes [BR:
pfz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
AV641_17690
Ribosome biogenesis [BR:
pfz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AV641_17690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AMB80768
LinkDB
All DBs
Position
3938729..3939421
Genome browser
AA seq
230 aa
AA seq
DB search
MRVDRFLSNLPQFSRQQVRLLLIEKRIRVDGRIVCDPHHEIRAFSRIECDDVLLQAGKPA
RYFMLHKPPGCVSATQDPEHPTVLDLLDEPDKQELHIAGRLDFNTSGLMLITNDGQWSRR
LTQPQTKLPKVYYVETEQVIGQEYVSRFNEGVYFAYEDLTTQPAGLELLGPCSARLSIVE
GRYHQVKRMFGYFNNKVVHLHRESIGPLQLDSQLAPGQYRPLSPQEVDLF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtagaccgttttctgagcaacttgccccagttcagccgccaacaggtccgcctg
ctcctgatcgaaaaacggatacgggtcgatggccgcatcgtctgcgatccacaccatgaa
atacgggctttcagtcgcattgaatgtgatgacgtgctgctgcaggccggcaaacctgcg
cggtatttcatgctgcataaaccccccggttgcgtcagcgccacccaggacccggaacat
ccgacagtcctcgatctgctggatgaaccggacaagcaggaactgcatattgctggccga
ctggacttcaataccagcgggttgatgctgattaccaatgacgggcaatggtcacgccgt
ctgacccagccacagaccaaactgcccaaggtgtattacgttgagacagaacaagtcata
ggccaggagtatgtctccaggttcaatgaaggggtctatttcgcctatgaagacctgacc
acacaacccgccgggctcgaactgctgggcccttgcagtgcacgcctgagtatcgttgaa
ggacgctaccatcaggtcaaacgcatgtttggctacttcaacaacaaggttgttcacctg
caccgggagagcatcgggccattgcagctcgacagccagctcgcccccggccagtaccgg
cccctgagcccccaggaagtcgatctgttctga
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