Pseudomonas fragi: AV641_17790
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Entry
AV641_17790 CDS
T04285
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfz03021
]
AV641_17790
Transcription machinery [BR:
pfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AV641_17790
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
AMB80785
LinkDB
All DBs
Position
complement(3960312..3961316)
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AA seq
334 aa
AA seq
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MALSKEAPGFDIDDEVLLMDSGIDSDLMSEDDESTPTARTKSKKATATKQHKYIDYTRAL
DATQLYLNEIGFSPLLSPAEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGLS
LLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKEL
NVYLRAARELTQKLDHEPSPEEIANLLEKPVAEVKRMLGLNERVSSVDVSLGPDSDKTLL
DTLTDDRPTDPCELLQDDDLSQSIDQWLSELTDKQREVVIRRFGLRGHESSTLEDVGLEI
GLTRERVRQIQVEGLKRLREILERNGLSSESLFQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtaaagaagccccggggtttgacatcgacgatgaggtgctccttatggac
tccggcatcgacagcgacttgatgtcagaagacgacgaatcaacccctactgcccgcacc
aagtccaaaaaagcgaccgctacaaaacagcacaagtacattgactacacccgggcgctc
gatgcgacccagttgtatctcaatgaaattggcttttctccgttactctccccagcagaa
gaagttcattttgcgcgcttgtcgcaaagtggagatccggccgggcgcaagcgcatgatt
gaaagcaacttgcgtctggtggtgaaaatcgcccgtcgctacgtcaatcgtgggctctcg
ctactggatctgattgaagagggcaatctgggactgattcgcgcagtagagaagtttgac
cccgagcgcggtttccgtttctcgacttacgccacctggtggatccgccagacgattgaa
cgggcgatcatgaatcagacccgcaccattcgtttgccgattcatgtcgtcaaagagctc
aatgtctacttgcgggctgcacgcgaacttacgcaaaagctcgatcacgaaccttcccct
gaagaaattgccaatctgctcgaaaaacccgtcgcagaggtcaagcgcatgcttggactg
aatgagcgggtgtcctcggtggatgtttctttaggccctgattccgataaaaccctgctc
gataccctgacagatgatcgacctacagatccttgcgagctgcttcaggacgatgacttg
tcgcaaagtatcgatcagtggttgtctgaacttacagacaagcagcgtgaggtggtgatt
cgccgcttcgggttgcgtggtcatgaaagcagtacccttgaagatgttggtctggagatt
ggtctgacacgcgaacgtgttcggcagattcaagtcgaggggctcaagcgtttgcgcgag
atccttgagcgcaacggtttgtccagtgagtcgctgtttcagtaa
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