Pseudomonas fragi: AV641_18130
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Entry
AV641_18130 CDS
T04285
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K13490
two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
Organism
pfz
Pseudomonas fragi
Pathway
pfz02020
Two-component system
pfz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AV641_18130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AV641_18130
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pfz01001
]
AV641_18130
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfz02022
]
AV641_18130
Protein kinases [BR:
pfz01001
]
Histidine kinases
CheA family [OT]
AV641_18130
Two-component system [BR:
pfz02022
]
CheA family
WspE-WspRF (chemosensory)
AV641_18130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CheW
Hpt
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AMB80850
LinkDB
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Position
complement(4036960..4039248)
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AA seq
762 aa
AA seq
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MTPEQMRDASLLELFSLEAEAQTQVLNAGLLALERNPTQADQLEACMRAAHSLKGAARIV
GVDAGVSVSHVMEDCLVSAQEGRLYLQPEHIDALLQGTDLLMRIATPGSANVGPADIDAY
VGLMNRLLDGGDSHVSVAPPAFDVSQLLLPPEPAVPVVELALEADTAPEPGLRSRRRTDT
GERVLRVTAERLNSLLDLSSKSLVETQRLKPYLVTLQRLKRMQNSGLKALDYLRDQLKVL
DLSHEAQEALSDARRILAESQHLLSEQTAELDEFGWQAGQRAQSLYDTALACRMRPFADV
LVGQERMVRDLGRALGKQIRLEIDGEKTQVDRDVLEKLEAPLIHLLRNAVDHGIETPEQR
LLAGKPAEGLIRLRISHQAGLLALQLSDDGAGVDLERLRQTIVERQLSTASTVAQLSEEE
LLAFLFLPGFSLRDTVTEVSGRGVGLDAVQHMVRLLRGAIVLEQTSGQGSRFSLEVPLTL
SVVRSLVVEVADEAYAFPLAHIERMRDLMPDEIVQLEGRQHFWHEGQHVGLVAASQLLQR
PPSQSEDETLKVVVIRERDVVYGVAVERFIGERTLVVLPLDPRLGKVQDISAGALLDDGS
AVLIVDVEDMLRSVDKLLNTGRLERIDRRNRHAAQLTRKRILVVDDSLTVRELQRKLLIN
RGYEVAVAVDGMDGWNALRAEHFDLLITDIDMPRMDGIELVTLLRRDNRLQSMPVMVVSY
KDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGGAQP
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgagcaaatgcgtgacgcctcgttgcttgagttgttcagtcttgaggccgag
gcccagacccaggtcctgaatgccggcctgttggcgctggagcgtaacccgactcaggcc
gaccagctcgaagcctgcatgcgcgcggcccactccctcaagggggcggcgagaattgtc
ggcgtggatgccggggtcagcgtttcccatgtcatggaggattgcctggtcagtgcccag
gaaggccgtctgtacctgcagcccgagcatattgatgccttgttgcagggcactgacttg
ttgatgcgtattgccacaccaggcagtgccaacgtcggcccggccgacattgatgcctat
gtcgggctgatgaaccgcttgcttgatggcggcgacagccatgtctcggtggcgcccccg
gcgttcgacgtgtcgcagctgttgctgcccccggagccggccgtgcctgtggttgagctg
gcgctcgaggctgacaccgctccggagcctggtcttcggtcccggcgccgtactgatact
ggcgaacgggtgttgcgggtcaccgccgagcggctcaacagtttgctcgatctgtccagc
aagtcattggtcgaaacccagcggctcaagccttatctggtgacgttgcagcgcctcaag
cgcatgcaaaacagcggtctgaaagcattggactacctgcgcgaccagctcaaggtgctg
gatctgagccatgaagcgcaagaggccttgtctgatgcgcggcggatactggctgagtcc
cagcatttgctgagtgaacagactgccgaactcgacgaatttggctggcaggccggccag
cgcgcgcaatcgctgtacgacaccgcgctggcgtgccgcatgcggccatttgccgatgtg
ctggtcggtcaggagcgcatggtccgtgatttggggcgcgccctgggcaaacagatccgc
cttgaaatcgatggcgagaaaacccaggtcgaccgtgatgtactggaaaaactcgaagcg
ccgctcatccatttgctgcgcaatgccgtcgatcacgggatagaaacgccggaacagcgg
ctgctggccggcaaacctgccgaaggcctgattcgtttgcgcatctcccatcaggcgggt
ttgctggcgctgcagttgagcgatgacggcgcgggtgttgatcttgagcgtttacgccag
accatcgtcgagcgccagttgtcgacggcttccaccgtggcacagctgagcgaagaggaa
ctgctggcctttctctttctgccgggcttcagcctgcgcgacaccgtgaccgaagtctcc
ggacgcggcgtcgggctggatgcggtgcaacacatggtgcgcctgctgcggggcgcaatc
gtcctggagcagacttcggggcagggcagtcgtttcagtctggaagtgccgctgaccctg
tccgtggtacgcagtctggtggttgaagtggccgacgaagcctatgcctttccactggcg
cacatcgagcgcatgcgcgacttgatgcccgatgaaattgtgcagctcgaaggtcgtcag
catttctggcacgaagggcagcacgtggggctggtggctgccagccaactgttgcagcgc
cctccaagccagagcgaggatgaaaccctcaaggtggtggtcattcgcgagcgtgatgtg
gtgtatggcgtggccgtcgagcgttttatcggtgagcgcacgctggtggtactgcccctc
gatccgcgcctgggcaaggtgcaggatatttcggccggagccttgctcgacgacgggtct
gcggtactgattgtggatgtcgaagacatgctgcgatccgtggacaaactgctcaatacc
gggcgtctggagcgaattgaccggcgtaaccgccacgccgcgcaactgacccgcaaacgc
attctggtggtggatgactcgctgacggtacgcgagttgcagcgcaaactgctgatcaac
cggggctacgaagtggccgtggccgttgatggcatggacggctggaacgccttgcgggcc
gagcacttcgatttattgatcaccgacatcgatatgccgcgcatggatggcatcgaactg
gtcacgctgttacgacgtgacaaccgtttgcaatcaatgccggtgatggtggtttcgtat
aaagatcgggaagaggaccgccggcgcggactggatgccggggccgactattatctagcg
aaagccagtttccatgacgatgctctgcttgatgcagtggttgagctcattggaggagct
caaccatga
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