Pseudomonas fragi: AV641_18330
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Entry
AV641_18330 CDS
T04285
Name
(GenBank) murein transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfz01011
]
AV641_18330
Enzymes [BR:
pfz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AV641_18330
Peptidoglycan biosynthesis and degradation proteins [BR:
pfz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AV641_18330
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
NMT1
DUF5694
Motif
Other DBs
NCBI-ProteinID:
AMB80890
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All DBs
Position
4082026..4083483
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AA seq
485 aa
AA seq
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MFSLTAFRQRGARWLLVTGLFLMLGACVEKPSTLERVKEDGVLRVITRNSPATYFEDRNG
ETGFEYELVKRFADDLGVELKIETADNLDDIFIQLGKPDGPALAAAGLVSSEKRLQQAKF
SHPYLEVTPQIIYRNGQSRPTNAADLVGKRIMVLKGSSHAEQLAELKKQYPGIEYEESDA
VEVVDLLRMVDEGQIDLTLVDSNEVAMNQVYFPNVRVAFDLGDARSQRWAVMAGEDNSLL
NEINAYLDKVEKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPKYEKFFKDAAKKE
QVDWRLLAAMGYQESLWQPTVTSKTGVRGLMMLTQNTAQAMGVSNRLDAQQSIMGGAKYL
ALIKSELDDDIEEPDRTWFALAAYNVGGGHLDDARKLAKKEGLNPNKWLDVKKMLPRLAQ
KQWYSKTRYGYARGGEPVHFVANIRRYYDILTWATQPQLEGDQAADGKLHIPGINKTKPK
EEPQL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctaactgcattccgccagcgtggagccagatggctactcgtaaccggactc
ttcctgatgctcggtgcctgcgttgaaaaacccagtacccttgagcgcgtaaaggaggat
ggggtactgcgggtgatcacccgtaacagcccggccacctacttcgaagatcgcaacggc
gaaaccggcttcgaatacgagctggtgaagcgctttgccgacgatctgggcgtcgaactg
aagatcgaaacagccgacaacctggacgacatcttcatacagctgggtaaacctgacggt
cccgctttagctgctgccggtctggtcagcagcgagaaacgcctgcagcaagccaagttc
tctcacccgtaccttgaagtcacgccccagatcatctaccgcaacggtcagtcgcgcccc
accaatgccgccgatctggtgggcaaacgcatcatggtgcttaaaggcagctcccacgcc
gagcaacttgccgaactcaagaagcaatatcccggaatcgaatacgaagagtccgacgct
gtcgaggtcgtcgacctgttgcgcatggtcgatgaaggacagatagacctgaccctggtc
gactccaacgaagtggcaatgaaccaggtgtacttccccaacgttcgcgtggcctttgac
ctgggtgatgcccgcagccagcgctgggcggtaatggccggtgaagacaacagcctgctc
aacgagatcaacgcctacctggacaaggtcgaaaagaacggcaccctgcaacgcttgaag
gaccgttactacggccacgtcgacgtactgggttacgtcggcgcctataccttcgcccag
cacctgcagcagcgcctgcccaaatacgaaaaattcttcaaggatgcggccaaaaaggaa
caggtcgactggcgcctgctggcagccatgggctatcaggaatccttgtggcagcccacc
gtcacctccaaaaccggcgttcgcggcctgatgatgctgacccagaacactgcacaagcc
atgggcgtgtccaaccgcctggacgcgcagcaaagcatcatgggcggtgccaagtacctg
gcgctgatcaagagcgaactggacgacgatatcgaagagcctgatcgcacctggtttgca
ctggcggcctacaacgttggcggcggtcacctggatgacgcgagaaagctggccaagaaa
gaaggcctgaacccgaacaagtggctggacgtgaaaaaaatgctgcctcgccttgcgcaa
aagcagtggtacagcaaaacccgctatggctacgcccggggcggcgagcccgtgcacttt
gtggccaacatccgtcgttactacgacatcctgacatgggccacacagccacagcttgag
ggcgatcaggccgctgacggcaagctgcacataccgggtatcaacaagaccaagcctaaa
gaagagccgcagctttaa
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