Pseudomonas fragi: AV641_18390
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Entry
AV641_18390 CDS
T04285
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AV641_18390
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfz01007
]
AV641_18390
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfz03016
]
AV641_18390
Enzymes [BR:
pfz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
AV641_18390
Amino acid related enzymes [BR:
pfz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AV641_18390
Transfer RNA biogenesis [BR:
pfz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AV641_18390
Prokaryotic type
AV641_18390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AMB80902
LinkDB
All DBs
Position
4095327..4098173
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AA seq
948 aa
AA seq
DB search
MDKTYQPHAIETSWYKTWEEQNYFAPQGAGDPYTIMIPPPNVTGSLHMGHGFNNAIMDAL
IRFRRMQGRNTLWQPGTDHAGIATQMLVERQIEAQGLNRHDLGREKFLDKIWEWKDQSGG
NISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAI
SDLEVENHDEKGFLWNLRYPLADGAKTAEGLDYLVVATTRPETMLGDAAVAVNPEDERYK
ALIGKFVELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDK
NAVVLPAAQVFNLDGKLNETIDGTLPAKYAGLDRFEARKQIVADFEAAGLLVSVDDHALK
VPKGDRSGTIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRDIQDW
CISRQLWWGHRIPAWYDESGKVYVGRDEAEVRAKNNLGPDVALQQDNDVLDTWFSSGLWT
FSTLGWPEKTDALKTFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYV
HGLVRDGQGQKMSKSKGNVLDPLDIIDGIELEDLVAKRTTGLMQPKLLKKIEKQTRDEFA
DGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVLDKGEDCGQNG
EAYELSLADRWIISQLQRTEAEVTRHLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW
DENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRIAPLAGVEGKTIMLQPWPV
ANEARIDQAAEDDIEWLKGLMLGTRNIRGEMNIGPGKPLQLYLKNVSSEDQRRLTENDAL
LKKLAKLESITVLQDGAEAPLSATALVGEMEVLVPMAGLIDKDAELARLDKEIQRLHGEV
ARVGGKLSNAAFVDKAPAEVIEKERAKLAEAEQALSKLAEQHARISSL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggataagacctaccagccgcacgccattgaaacttcctggtacaaaacctgggaagaa
cagaattatttcgccccgcaaggcgcgggcgacccgtacaccatcatgattccgccgccg
aacgtcaccggcagcctgcatatgggccacggcttcaacaacgcgatcatggacgccctg
atccgtttccgccgcatgcagggtcgcaacaccctgtggcagccgggcaccgaccacgcg
ggtatcgctacccagatgctggttgagcgtcagatcgaagcacaaggtctgaaccgccac
gacctgggccgcgagaagttcctggacaagatctgggaatggaaagatcagtccggcggc
aacatcagccgtcagattcgtcgccttggctcgtccgtagactggagccgcgaacgcttc
accatggacgacggtctgtccgaagccgtgaaggaagcctttgtgcgcctgcacgaagac
ggcctgatctatcgcggcaagcgcctggtcaactgggacaccaagctgcacaccgccatt
tccgaccttgaagtggaaaaccacgacgagaaaggtttcctgtggaacctgcgctacccg
ctggctgatggcgccaaaaccgctgaaggcctggactacctggtagttgcaaccacccgt
ccggaaaccatgctcggcgatgctgccgttgcggtaaacccggaagacgaacgctacaag
gccctgatcggcaaattcgtcgagctgccactggttggccgtcgcatcccgatcattgct
gacgattactgcgatcctgaattcggcactggctgtgtgaaaatcacgccggcccacgac
ttcaacgactacgaagtcggcaagcgccacaacctgccgctgctgaacattttcgacaaa
aacgcggtggtactgcctgccgcccaggtgttcaacctcgacggcaaactgaacgaaacc
atcgacggcaccctgccggccaagtatgccggtctggaccgcttcgaagcgcgcaagcaa
atcgtcgccgacttcgaggccgcaggcctgctggtgagcgtcgacgatcacgcgctgaaa
gtaccgaagggcgaccgttcgggcaccatcatcgagccgtggctgaccgatcagtggtac
gtatcgaccaagccgttggctgaaccggccattgccgccgttgaagatggccgcatcgcg
ttcgtacccaagcagtacgaaaacatgtacttctcgtggatgcgcgacatccaggactgg
tgcatcagccgtcagctgtggtggggccaccggattccggcctggtacgacgagtcgggc
aaggtctatgtaggccgcgacgaagccgaagtccgggccaagaacaacctgggcccggat
gttgcgctgcaacaggacaacgacgtgctcgacacctggttcagttcgggtctgtggacg
ttctccaccctgggctggccggaaaaaaccgacgcgctgaaaaccttccactcaactgac
gtgctggttaccggcttcgacatcattttcttctgggttgcccggatgatcatgctcacc
atgcacctggtgaaaaatgaagacggcaccccgcaagttccgttcaagaccgtgtatgta
cacggcctggtacgtgacggtcagggccagaagatgtccaagtccaagggcaacgtcctg
gacccgctggacatcatcgacggcatcgagctcgaagacctggtggccaaacgcaccacc
ggcctgatgcagccaaaactgctgaagaagatcgaaaaacagacccgtgacgaattcgct
gacggcatcgccagctacggcaccgacgccctgcgcttcactttctgttcgctggcatcc
accggtcgcgacatcaagttcgacatgggccgcgttgaaggctatcgcaacttctgcaac
aagatctggaacgccgcgcgctacgtgctggacaagggcgaagactgcggccagaacggc
gaagcctacgaactgtcactggctgaccgctggatcatctcgcagctgcagcgcaccgaa
gccgaagtgacccgtcacctcgaccagttccgcttcgacctcgccgctcaagccctgtac
gagttcatctggaaccagtactgcgactggtacctggaactgtccaagcctgtgctgtgg
gacgaaaacgctccggttgaacgccagcgtggcacgcgtcgcaccctggtgcgggtactg
gaagtggccttgcgcctggcacacccgttcatgccgttcatcaccgaagaaatctggcag
cgcatcgcgccgctggccggtgtcgaaggcaagaccatcatgctgcaaccatggccggtg
gcgaatgaagcccgcatcgaccaggctgccgaagatgatatcgaatggctcaagggcctg
atgctcggcacgcgcaatatccgtggcgagatgaacatcggtcctggcaagcctttgcag
ctgtacctgaaaaacgtcagcagcgaagatcagcgccgtttgaccgagaacgacgccctg
ctcaaaaagctggctaaactcgaatccatcaccgtgctgcaagacggcgccgaagcaccg
ctgtccgccaccgctctggttggcgagatggaagtgctggtgccaatggccggcctgatc
gacaaagatgcagagttggcgcgcctggacaaggaaatccagcgcttgcacggcgaagtt
gcccgcgttggcggcaagttgtcgaacgccgcattcgttgacaaggctccggccgaagtc
atcgagaaagaacgtgccaagttggccgaagccgaacaggccttgagcaaactggcagaa
cagcacgcgcggatttccagcctgtaa
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