Pseudomonas fragi: AV641_18910
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Entry
AV641_18910 CDS
T04285
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfz03019
]
AV641_18910
Messenger RNA biogenesis [BR:
pfz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AV641_18910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
AAA_22
SKI
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMB81001
LinkDB
All DBs
Position
4198060..4198917
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AA seq
285 aa
AA seq
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MRLVIVSGRSGSGKSTALAVLEDNGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPQLLEEVRNRHIQCDVLYLDADEETLLKRFSETRRRHPLSSASRSLAEA
IRDESQLLGPIADLADLTINTTNLNLYQLRDTIKLRLLNKPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRELSGLDQPVADYLAAQPDVEEMFQDISSYLLKWLPRFAA
SNRAYVTIGIGCTGGHHRSVYLTERLGKCLQQTLKNVQVRHRDLT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctagtcattgtcagcggacgctccggctccggtaaaagcaccgccctcgccgtc
ctcgaagataacggtttctattgcatcgacaacctgcccgccggcttgctgccagagttg
gcggaacgtgcactgattcatactgaactggcacagccgctggtggcggtatcgatcgat
gcgcgaaacctgccaagccatttgtcacgctttccgcaattgcttgaagaagtgcgcaac
cggcatatccagtgcgatgttctgtacctcgacgccgatgaagaaaccttgctcaagcgc
ttctcggaaacccgtcggcggcatccactgagcagcgcgagccgttcactggccgaggcc
attcgtgatgagagccagttgctcggacccattgccgaccttgccgacctgacgatcaac
accaccaatctgaacctgtatcagctgcgcgacaccatcaagctgcgcctgctgaacaag
cctgaacccggcaccgcctttctggttgagtcgtttggcttcaagcgcggcatgccggtc
gatgccgacctggtatttgacgtgcgttgcttgcccaacccctactggaagcccgaactg
cgcgagctgtcagggctggatcagcccgttgcggattacctggcagcgcagcctgatgtc
gaagagatgttccaggacatctccagctacctgctcaaatggctaccccgcttcgccgcc
agcaaccgcgcctatgtcaccatagggatcggctgcactggcggtcatcaccgctcggtg
tatctgaccgagcgactcggcaaatgcctgcaacaaactctgaagaatgtccaggttcgc
caccgcgaccttacttga
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