Pseudomonas fragi: AV641_19070
Help
Entry
AV641_19070 CDS
T04285
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfz03400
]
AV641_19070
Enzymes [BR:
pfz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AV641_19070
DNA repair and recombination proteins [BR:
pfz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AV641_19070
Prokaryotic type
AV641_19070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMB81032
LinkDB
All DBs
Position
4231106..4232551
Genome browser
AA seq
481 aa
AA seq
DB search
MQLIWLRSDLRQNDNTALSAAAERGPTVAVYLISPEQWLAHDDAPCKVDFWLRNLSVLSD
SLEQLNIPLLIRSAPAWDQAPAVLVELCQQLGIEDVHVNDEYGIHETRRDQAVARALDAK
GIGFHRHLDQLLFQPGSVLTKTGTYFQVFSQFRKVCYERLHTGLPPIVATPRPQAQLTIA
RDAIAQSVSGFAPPDETLRALWPAGEDEARQRLARFADEQIHYYKEERDLPAKPGTSQLS
PYLAAGVISPRQCLHAALLSNNGEFESGSVGCATWISELIWREFYKHILVGYPRVSRHRA
FRADTEFLPWRDAPQELAAWKEGRTGIPIIDAAIRQLLATGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMQHLIDGDLAANNGGWQWSSSTGTDSVPYFRIFNPLSQSERFDPEGRFIK
HWLPELATLNKKEIHNPAIAGGLFGVADYPRPIVDLKHSRERALSAFKNLPSRQLYEVCD
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgccaaaacgacaacaccgccctgagcgcc
gccgctgaacgcggccccactgtggccgtgtatctcatcagccccgagcaatggctggcc
catgacgacgcgccgtgcaaagtcgatttttggctgcgtaatctgagcgtcctgagcgac
agcctcgagcaactgaatatcccgttacttattcgcagcgcgcccgcctgggaccaggcc
cccgcggtgctggttgaactgtgccaacagttgggcattgaggacgtgcatgtaaatgat
gaatacggcatccatgaaacccggcgcgatcaagccgtcgcccgtgccctcgacgccaag
ggcatcggctttcatcgtcacctcgaccaactgctgtttcaacccggtagtgtgctgacc
aaaaccgggacctactttcaggtattcagccagttccgcaaggtttgctatgagcgcctg
cacacgggactgccgcccatagtggccacaccccggccccaggcgcagctgaccattgcc
cgggatgcgattgctcaatctgttagcggctttgcgccgcccgacgaaaccctgcgcgca
ctctggccggccggggaagacgaagcccggcagcgcctggcacgcttcgccgacgagcaa
atccactactacaaagaagagcgcgacttgcccgccaaacctggcaccagccagctttcg
ccctacctggcagcaggcgttatctcaccccgccaatgcctgcatgcagcactgctcagc
aacaacggcgaatttgaaagcggcagtgtcggctgcgcgacctggatcagcgaactgatc
tggcgcgagttctataaacatattctggtgggttacccacgggtttcccggcatcgcgca
ttcagagccgacaccgagttcttgccctggcgtgatgccccacaagaactggcggcatgg
aaagaggggcgcaccggtatcccgatcatcgacgcggccattcgccaactgctggcaacc
ggctggatgcacaaccgcctgcggatggtggtggcaatgttcctgaccaagaacctgttg
atcgactggcgcgagggtgagcgcttctttatgcagcacttgattgatggcgatctggca
gccaacaacggcggctggcagtggagctcatccaccgggaccgattcggtgccctacttc
agaattttcaaccccttgagtcagtccgagcgcttcgaccccgaaggtcgcttcatcaag
cactggctgccagaacttgcgacgctgaataaaaaagagattcataacccggccattgcc
ggcggcctgtttggggttgccgattatccgcggccaattgtcgacttgaaacacagtcgc
gaacgggccctcagcgcgttcaagaatctgccgtcgcgccagctttacgaggtgtgcgat
ggctga
DBGET
integrated database retrieval system
