Pseudomonas fragi: AV641_19210
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Entry
AV641_19210 CDS
T04285
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K07677
two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:
2.7.13.3
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AV641_19210
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pfz01001
]
AV641_19210
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfz02022
]
AV641_19210
Enzymes [BR:
pfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
AV641_19210
Protein kinases [BR:
pfz01001
]
Histidine kinases
NarL family
AV641_19210
Two-component system [BR:
pfz02022
]
NarL family
RcsC-RcsD-RcsB (capsule synthesis)
AV641_19210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
Hpt
PDE8A_N
PAS
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMB81055
LinkDB
All DBs
Position
complement(4256199..4259447)
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AA seq
1082 aa
AA seq
DB search
MKQAKVRLGALALSSLRLNKLLLLLTGLALLLVGMSYWAVNRLLMEEREKTEFHFARLIE
SIHEHEDFLRIGAESYDHASGNFSMDNKPRSHIELMRQDNEVLFQNRDTAKSLPFTVSQR
DTFSLDEMQGVYSFGVQLTDLFTAYWSDSYYSAPQVFVFSPTAQFSIAVPGIDGTRQYPL
LFKDNFFAVTKRLYDAFLPRRQALNSDQVLWMKAPLELIQKRKYIVGAIKVNLPQRFMQA
AKEGSSVILSALLDVSDVSDLERLLMRPTNSRLTLISPAGDVLLGDARNVEELAPGLSFT
RDGLRFKLTSGGADPWIGLYAITYQNFFGYAKWPLMGAAGLFGLFVLIGWRVNRWYRVRI
IEPAQRSSQSLAESEEFNRVMLDNAPVGLCVVERATGVILLENQRAQQWQGTPELIALLK
RDYAEREPGEVQLEVAGRYLQACFAFARYKGRDVVLCGFNDITRHVDDANLMEQARLAAD
EASKAKTLFLATMSHEIRTPLYGVLGNLELLELTPLNERQHEYLKTIQRSSAVLFQLISD
VLDVSKIESGQMAVQAQAFCPLDLLEDCVRSYSAAASNKGLKLFACADANLPPLVCGDAV
RIRQIINNLLSNAIKFTDSGRVVLRLKVTGIEPDHVSLQWQVSDTGIGISEQQLTRLFKP
FSQVGGSERAGGAGLGLSICSRLSEMMGANLRVVSEPGLGSSFSLQMSLPVIAGALLNSA
DIDLRNVNIHVRAPLKDIGQSLVDWLCAWGARAQLLPVSEAEDRDAILLDIVTGSTQSQQ
AAGERVIATASGRSQAQRTARGWEVNAYDIRAIARTLMQVAQGTAPQLSATVPQPQASLE
LNVLVAEDNPVNREILKEQLEALGVRVTLAEDGEQALVRWSEGSFDLVITDVNMPRLDGY
QLTRRLRELDPAVPIIGVTANAMREEGEHCLEVGMNAWLVKPLSLSTLRQTLCAYCPQTT
QASAPVLESATRAEPADDLEGWITLSPAMHRLFISTLQEDLTQAGLALQQGDSATLVSYV
HRINGSFATVCAVNLAAACNECEIALLRESLNPESAVAIKALLNRLHGVVARMVEGELYP
EG
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagcaaaggtacgtctcggtgcactggcattgagttcattgcgactgaacaag
ctgttgctcctgctgaccggacttgccctgttgctggtgggcatgagttattgggccgtt
aaccgtttgttgatggaggaacgcgaaaagaccgaattccacttcgcacggttgattgaa
agtattcatgaacacgaagactttttacgcattggcgctgaaagttatgaccacgccagt
ggcaacttttcgatggacaacaagccgcgctcgcacattgaattgatgcgtcaggacaac
gaagttttatttcaaaaccgggacacggccaagtccctgccatttaccgtcagtcagcgc
gacacgttcagcctggatgaaatgcagggggtctattcgtttggcgtacagttaaccgat
ctgttcacggcttactggtccgattcttattattcggcaccgcaagtgtttgtcttttca
cccaccgcccagttttccattgccgtccccggtattgatggcacccgccagtacccgctg
ttgttcaaggataatttctttgcagtgaccaagcgtttgtacgacgcgtttttgccccgg
cgtcaggcgctcaacagtgatcaagtgttgtggatgaaagctccgctcgagctcattcag
aagcgcaaatacatagtgggcgctatcaaggtcaatcttccccagcgctttatgcaggcg
gctaaagaggggagttcggtgattctcagcgccttgcttgatgtcagcgatgtgagtgac
cttgaacgcttgttgatgcgccccaccaacagtcgcctgaccctgatctcccctgctggc
gacgtgttgttgggtgatgctcggaatgtcgaagagctggcgcccgggctgagttttacc
cgtgacggtctgcgcttcaaattgacctcaggcggggccgacccctggatcggcctgtat
gccatcacgtatcagaacttctttggctatgcgaaatggcccttgatgggcgcggcgggc
ctgtttgggttgttcgtcctgattggctggcgcgtcaaccgctggtatcgggtgcggatc
atcgagcctgctcagcgctccagccagtccctggctgaaagtgaagagttcaatcgggtc
atgctcgataacgcgcccgttggcctgtgtgtggtagagcgtgcaaccggcgtcatattg
ctggagaaccagcgcgcgcagcagtggcagggcacgcctgaactgattgccttgttgaag
cgtgattacgccgaacgcgagccgggtgaggtccagcttgaagtggccgggcgttatctg
caggcctgttttgcattcgcccgctacaagggcagggatgtggtgctgtgcggtttcaat
gacatcacccggcatgtggatgacgccaatctgatggagcaggcaaggctcgcggccgat
gaagccagcaaggccaagaccctttttctggccaccatgagccatgaaatccgcacccct
ctgtacggggtgctgggcaatctggagctactggagctcacgcctctgaatgagcgccag
cacgagtacctgaaaaccattcaacgttcatccgccgttctgtttcagttgatcagcgat
gtactggatgtatccaagatcgagtcggggcaaatggcggtacaagcccaagccttttgc
ccgctggatttacttgaagattgcgtgcgcagttactcggcggcagcgagcaataaaggc
ttgaagctgttcgcctgtgcggacgcaaacttgccgccactggtatgcggggatgcagtg
cgtatccggcaaatcattaataacttgctgagtaacgcgatcaagttcaccgattcaggc
cgggttgttctcaggctcaaagtgaccggcattgaaccggaccatgtgtcgctgcagtgg
caggtttctgataccggtatcggtatcagcgagcagcaactgacccgcctgttcaagcct
ttttcccaggtcggtggcagcgagcgggcaggcggggcagggctgggtttgtctatctgc
tcgcggttgagtgaaatgatgggcgccaacttgcgggtggtcagtgagccgggacttggc
agcagcttctcattacagatgtccttgcccgtcattgccggcgcgctgctcaacagtgca
gacattgatctgcgcaatgtgaatatccatgtccgtgcgccgctcaaggatatcggccag
agcctggttgactggttgtgtgcctggggcgcgcgggcgcagttattgccggtctcggaa
gctgaagaccgggatgcgatcctgctggatatcgtcacgggttccacgcaatcgcaacaa
gctgcgggtgagcgcgtcattgcgactgcgtcgggccgcagccaggcgcaaaggacggct
cggggatgggaggtcaatgcgtatgacatccgggcgattgccagaaccttgatgcaggtg
gcgcagggaactgcaccgcagttgagcgccactgtgccgcagccgcaggcaagtctggag
ttgaatgtgttggtggccgaggacaatccggtcaaccgcgaaatcctcaaggagcagctt
gaagccctgggcgttcgagtgacattggcagaggatggcgagcaagccttggtgcgctgg
agcgaaggctcgttcgatctggtgatcaccgatgtgaacatgcccaggctcgacggttat
cagttgacccggcgcttgcgtgagcttgatccggctgtaccgattatcggtgtgaccgcc
aatgccatgcgtgaggagggtgaacactgtctggaagtcgggatgaatgcatggctggtc
aaacccttgagcctgagcaccttgcgccagaccctgtgcgcttattgcccgcagacaacg
caggcctctgcgcccgtgctggaatccgccaccagggctgaacccgcagacgaccttgaa
ggctggattacgctttcgccggccatgcatcgcctgtttatcagcaccctgcaggaggac
ctgacccaggccgggctggcgctgcagcaaggcgatagcgcgacactggtcagttatgtg
catcgaatcaatggttcatttgccacggtctgcgcggtcaatctggcggcagcatgcaat
gagtgtgaaatcgccttgctgcgtgagtccttgaaccctgagtcagcagtggcgatcaag
gcattgcttaaccgcctgcacggcgtggtggcgaggatggttgaaggggagctgtaccct
gaaggttag
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