Pseudomonas fragi: AV641_19530
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Entry
AV641_19530 CDS
T04285
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfz03016
]
AV641_19530
Enzymes [BR:
pfz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AV641_19530
Transfer RNA biogenesis [BR:
pfz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AV641_19530
Prokaryotic type
AV641_19530
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AMB81111
LinkDB
All DBs
Position
complement(4332286..4333203)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLLTRPVTVGRADIEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTITRLELLASEGDTARLSVDCTKGTYI
RTLVEDIGEQLGCGAYVAELRRTHAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggtatcatcctgctcgacaagccg
cttggattcacctccaacgcggccctgcagaaagtccgctggctgctcaatgccgagaag
gcagggcacaccggtagcctcgatccattggccagtggtgtattgccgctgtgctttggc
gaagctaccaagttttcgcaatacctgctcgattccgacaagggttatgaaaccctgatg
caattgggcaagaccacgaccacagcggatgccgaaggcgatgttttgctgacgcgtccg
gtgaccgttggtcgcgccgatattgaagctgttttacccaaattccgtgggcaaatcagt
cagataccgccgatgtactctgcactcaagcgtgacggccagccgctttacaagttggct
cgtgcaggcgaagtggtggagcgcgaaccgcgttctgttactattacccgcctcgaatta
ctggccagcgaaggcgacactgcgcgcttgtccgtcgactgcaccaaaggcacctatatc
cgtaccctggtggaagatattggtgagcaactgggttgcggtgcatacgttgcagagctg
cgtcgtacacacgccggacctttcagcctggcccaaacggtcactctggaagagttggaa
gctgtgcatgccgaaggcggaaacgaagcggttgaccgcttcctgatgccatcggacagc
ggtttgctggactggcctttgctgcacttctcggaacacagcgcattctattggcttaat
ggccaaccggtacgcgctccggatgctccgaagttcggcatggtgcgggtacaagatcac
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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