Pseudomonas fragi: AV641_20000
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Entry
AV641_20000 CDS
T04285
Name
(GenBank) diguanylate cyclase
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AV641_20000
Enzymes [BR:
pfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
AV641_20000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
HxlR
Motif
Other DBs
NCBI-ProteinID:
AMB81196
LinkDB
All DBs
Position
complement(4443059..4444315)
Genome browser
AA seq
418 aa
AA seq
DB search
MSLFKAPEQRRSLRSVLRRGHLGVALVAVILASASMTLLGVLALKVYADHNLHLIARSIN
YTVEAAVVFDDQVAATEALDMIASTEAVAEAEVYTANGELLAHWRRPETGLLSKVEMLLA
DSLLQQPIKVPIEHQGREVGVVVVSGHGANMLRFLLSGLLGVLLCTALSAWSALYLSRRL
LGGITGPLQQLAEVAHAARIDRAFDRRVPPAHIAELDSLGNDFNALLDELESWQSHLQNE
NQSLAHQASHDSLTNLPNRAYFAARLALTLRTLNKPGDKVAVLFLDSDRFKDINDTHGHA
AGDAVLVAVATRIRAQLRENDVVARLGGDEFAISLTPLHRIEDAQRIADKIIASMLEPIR
LPDDSHVVTSLSIGIAVYPEHGATPDTLLCAADSAMYQAKRLARGGQQVAELEYPAAQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcaaagctcctgaacagcggcgcagcctgcgctctgtgctgcggcgcggg
catctgggagtagcgctggtagcagtgatcctggccagcgcgtccatgaccctgctgggc
gtgctggcgctcaaggtttatgcggaccacaacctgcacttgatcgcccgctccatcaac
tacaccgtggaagctgccgtggtgtttgatgatcaggtggcggcaaccgaagcgctggac
atgatcgcttccaccgaagccgtcgccgaggcagaggtctacaccgccaatggtgaattg
ctcgcccattggcggcgcccggaaaccggcttgctgtcgaaggtcgaaatgctgctggcc
gacagtttgctgcaacagccgatcaaggtcccgattgagcatcaggggcgggaagtcggg
gtggtggtggtcagcgggcacggcgccaacatgttgcgctttttactcagcggcttgctt
ggcgtgcttctgtgtacggcgctcagtgcctggagcgcgttgtacctgtcgcggcgtctg
cttggcggcatcaccggccccttgcagcagttggccgaagttgcccacgccgcgcgcatc
gatcgggcgtttgaccgtcgcgtgccgcctgcccatatcgccgagctggacagcctgggc
aacgacttcaatgccttgcttgatgagctggagtcatggcaaagccacttgcaaaatgaa
aatcagagtctggcgcaccaggccagccacgactcgctgaccaatctgcccaaccgtgcc
tattttgccgcgcggctggcgctgaccttgcgcacgctgaacaagcccggagataaggtt
gccgtgctgtttctcgacagcgaccgctttaaagacatcaacgatacccatggccatgcc
gcaggagacgcggtgctggtcgcagtggcaacgcggatccgcgcccagttgcgcgaaaac
gatgtggtggcgcgtctgggcggcgacgaattcgccatatccctgaccccgctgcaccgc
atcgaagatgcccagcgtattgcagacaaaatcatcgccagcatgcttgagccgatccgg
ttaccggatgacagccatgtcgtgacgtcgctcagtattggaatcgccgtttaccccgaa
catggtgcaaccccggatacgctgctctgtgccgcggattcggcgatgtaccaggccaaa
cgcctcgcccgaggcgggcaacaggttgcggagttggagtaccccgcagcccagtga
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